RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MAN1A1P33908 653 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 TMED2Q15363 201 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 IRGCQ6NXR0 463 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 ZPBP2Q6X784 338 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 PHLDB2Q86SQ0 1253 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 TRABD2AQ86V40 505 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 RIBC1Q8N443 379 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-201ENST00000338910 IFT43Q96FT9 208 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 NLRP4Q96MN2 994 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 PLVAPQ9BX97 442 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 RNPEPQ9H4A4 650 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 NMRK1Q9NWW6 199 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 PCDHB2Q9Y5E7 798 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 CENPFP49454 3210 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 TOM1L1O75674 476 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 LMNAP02545 664 aaKnown RBP19.73■□□□□ 0.75
PSPC1-201ENST00000338910 PRKCBP05771 671 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 SSTR3P32745 418 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-201ENST00000338910 MAPK6Q16659 721 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 CLEC16AQ2KHT3 1053 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 C2CD6Q53TS8 623 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 OR52E8Q6IFG1 317 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 TAPT1Q6NXT6 567 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 PRUNE1Q86TP1 453 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 CFAP61Q8NHU2 1237 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 C9orf72Q96LT7 481 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 ACO2Q99798 780 aaKnown RBP19.73■□□□□ 0.75
PSPC1-201ENST00000338910 SMARCAD1Q9H4L7 1026 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 DLGAP2Q9P1A6 1054 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 MORF4L1Q9UBU8 362 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 GTF3C4Q9UKN8 822 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 NUB1Q9Y5A7 615 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 IGKV6-21A0A0C4DH24 114 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 SPAG7O75391 227 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 CST3P01034 146 aaPredicted RBP19.72■□□□□ 0.75
PSPC1-201ENST00000338910 PTPN4P29074 926 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 ADCY8P40145 1251 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 IGBP1P78318 339 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 CUL2Q13617 745 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 PDK4Q16654 411 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 MUM1Q2TAK8 710 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 EFCAB12Q6NXP0 572 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 MTHFD1LQ6UB35 978 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 TMEM270Q6UE05 265 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 CDR2LQ86X02 465 aaPredicted RBP19.72■□□□□ 0.75
PSPC1-201ENST00000338910 ZBTB8OSQ8IWT0 167 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 FAM81BQ96LP2 452 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 WDR35Q9P2L0 1181 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 UVRAGQ9P2Y5 699 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 GRID1Q9ULK0 1009 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 NEU2Q9Y3R4 380 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 PCDHB4Q9Y5E5 795 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 UMODL1Q5DID0 1318 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 PLXNA1Q9UIW2 1896 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 NVLO15381 856 aaKnown RBP19.72■□□□□ 0.75
PSPC1-201ENST00000338910 PRPF4O43172 522 aaKnown RBP eCLIP19.72■□□□□ 0.75
PSPC1-201ENST00000338910 CLCN3P51790 818 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 SLC18A1P54219 525 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 NCOA4Q13772 614 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 SPARCL1Q14515 664 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 CST9Q5W186 159 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 GRK7Q8WTQ7 553 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 HERPUD2Q9BSE4 406 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 DCLK3Q9C098 648 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 UBN1Q9NPG3 1134 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 STOML1Q9UBI4 398 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 LNPEPQ9UIQ6 1025 aa19.72■□□□□ 0.75
PSPC1-201ENST00000338910 PLXNB2O15031 1838 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 INO80B-WBP1J3KQ70 363 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 STRNO43815 780 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 FAM189A1O60320 539 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 ACO1P21399 889 aaKnown RBP19.71■□□□□ 0.75
PSPC1-201ENST00000338910 RRM1P23921 792 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 NOP14P78316 857 aaKnown RBP19.71■□□□□ 0.75
PSPC1-201ENST00000338910 PPP1R15BQ5SWA1 713 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 GPR142Q7Z601 462 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 UCMAQ8WVF2 138 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 INO80BQ9C086 356 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-201ENST00000338910 LRCH1Q9Y2L9 728 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 PPME1Q9Y570 386 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 CFHP08603 1231 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 ABHD2P08910 425 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 UNGP13051 313 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-201ENST00000338910 GCAP28676 217 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 VPS41P49754 854 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 OSTNP61366 133 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 NR1H3Q13133 447 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 KHDC1Q4VXA5 237 aaKnown RBP19.71■□□□□ 0.75
PSPC1-201ENST00000338910 TAF1BQ53T94 588 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-201ENST00000338910 SLC45A4Q5BKX6 768 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 C4orf50Q6ZRC1 276 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 DPP9Q86TI2 863 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 LRRC8CQ8TDW0 803 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 VCXQ9H320 206 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 CYLDQ9NQC7 956 aa19.71■□□□□ 0.75
PSPC1-201ENST00000338910 B4GALT5O43286 388 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 GAS2O43903 313 aaKnown RBP19.7■□□□□ 0.74
PSPC1-201ENST00000338910 VHLP40337 213 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 ADCYAP1R1P41586 468 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 ARHGAP1Q07960 439 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms