RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CXCR5P32302 372 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RPL7AP62424 266 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PLCB3Q01970 1234 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FPGSQ05932 587 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZNF268Q14587 947 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RPS6KA1Q15418 735 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FAM171BQ6P995 826 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZNF365Q70YC5 407 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CEP57Q86XR8 500 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CPNE8Q86YQ8 564 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 OSBPL9Q96SU4 736 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SLC4A5Q9BY07 1137 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 WDR35Q9P2L0 1181 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SYN3O14994 580 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZNF185O15231 689 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 BEST1O76090 585 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 OAZ2O95190 189 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SYN1P17600 705 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 COMTP21964 271 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ALDH7A1P49419 539 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TSPY1Q01534 308 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PPP1R15BQ5SWA1 713 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SPOUT1Q5T280 376 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 OR6B2Q6IFH4 312 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FUT10Q6P4F1 479 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 DCUN1D2Q6PH85 259 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 LRRTM3Q86VH5 581 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 STK32AQ8WU08 396 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 BCL7CQ8WUZ0 217 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MYLPFQ96A32 169 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MCRS1Q96EZ8 462 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 B3GALT6Q96L58 329 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MCEEQ96PE7 176 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TMLHEQ9NVH6 421 aa15.56■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SF3B1O75533 1304 aaKnown RBP eCLIP15.55■□□□□ 0.081e-11■■■■■ 43.1
CDK5RAP3-201ENST00000338399 TMEM191CA6NGB0 347 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 GABBR2O75899 941 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PRLRP16471 622 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 NPR3P17342 541 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 GSCP56915 257 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SLC8A3P57103 927 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 VARS2Q5ST30 1063 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CLEC20AQ6ZU45 233 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FAM183BPQ6ZVS7 135 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TMEM110Q86TL2 294 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FAM35AQ86V20 835 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 COG1Q8WTW3 980 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 HES6Q96HZ4 224 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CAPZA3Q96KX2 299 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PKMYT1Q99640 499 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MIS12Q9H081 205 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RC3H2Q9HBD1 1191 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 METTL5Q9NRN9 209 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 KRT82Q9NSB4 513 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 NLRC5Q86WI3 1866 aa15.55■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SIGLEC16A6NMB1 481 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 XPO1O14980 1071 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 OR4Q2P0C623 313 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FAM200BP0CF97 657 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 KRT3P12035 628 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TCP1P17987 556 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FGFR3P22607 806 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PLA2G4AP47712 749 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 EPHB4P54760 987 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MAP3K7CLP57077 242 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TAP1Q03518 808 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 BTG3Q14201 252 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PIGZQ86VD9 579 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PTPRDP23468 1912 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 KCNK3O14649 394 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SPOPO43791 374 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 AP1G2O75843 785 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PROSCO94903 275 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 LCP1P13796 627 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RFC1P35251 1148 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CACNA2D1P54289 1103 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SNX16P57768 344 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ELAVL2Q12926 359 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FAM102AQ5T9C2 384 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TAS1R1Q7RTX1 841 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SCUBE3Q8IX30 993 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 JOSD2Q8TAC2 188 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PIWIL1Q96J94 861 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 HSFY1Q96LI6 401 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SMOQ99835 787 aa15.54■□□□□ 0.08
CDK5RAP3-201ENST00000338399 DDX3YO15523 660 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PAPSS1O43252 624 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SLU7O95391 586 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 BDNFP23560 247 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RPL34P49207 117 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RABGGTBP53611 331 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 OGDHQ02218 1023 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MRPL58Q14197 206 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MAPRE1Q15691 268 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 WHAMMP3Q1A5X7 153 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CTXN3Q4LDR2 81 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms