RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PEBP4Q96S96 227 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 MAF1Q9H063 256 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 TMBIM4Q9HC24 238 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 AAASQ9NRG9 546 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 TMPRSS4Q9NRS4 437 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.25□□□□□ -0.29
LIMK1-201ENST00000336180 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 CST8O60676 142 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 MIPP30301 263 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 GPD2P43304 727 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 TCEAL1Q15170 157 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 ZC3H12AQ5D1E8 599 aaKnown RBP13.24□□□□□ -0.29
LIMK1-201ENST00000336180 SLC27A1Q6PCB7 646 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 C1orf228Q6PIY5 440 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 DNAJC14Q6Y2X3 702 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-201ENST00000336180 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 BCAS4Q8TDM0 211 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 SLC1A1P43005 524 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 IZUMO3Q5VZ72 239 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 RGMBQ6NW40 437 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 RFX6Q8HWS3 928 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 C3orf20Q8ND61 904 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 RXFP2Q8WXD0 754 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 PAAF1Q9BRP4 392 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 PLVAPQ9BX97 442 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 CDC42EP4Q9H3Q1 356 aaKnown RBP13.24□□□□□ -0.29
LIMK1-201ENST00000336180 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 GPS1Q13098 491 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-201ENST00000336180 OTUD6BQ8N6M0 293 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 KCTD6Q8NC69 237 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 GTF3C2Q8WUA4 911 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-201ENST00000336180 NT5C1AQ9BXI3 368 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 LRRC19Q9H756 370 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
LIMK1-201ENST00000336180 SIP14410 1827 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 SMIM28A0A1B0GU29 152 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 GABBR2O75899 941 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 PFKMP08237 780 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 PECAM1P16284 738 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 IFNAR2P48551 515 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 ARSEP51690 589 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 KLF1Q13351 362 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 FAM187BQ17R55 369 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 SOWAHAQ2M3V2 549 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 FAXCQ5TGI0 409 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 NOTUMQ6P988 496 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 ANKMY2Q8IV38 441 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 MREGQ8N565 214 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 EMID1Q96A84 441 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 ASB7Q9H672 318 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 BARX2Q9UMQ3 279 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 SUFUQ9UMX1 484 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 BHMG1C9JSJ3 638 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 AOC2O75106 756 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 GRM5P41594 1212 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 OTUD4Q01804 1114 aaKnown RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 LRRC14Q15048 493 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 ZNF467Q7Z7K2 595 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 SEC14L1Q92503 715 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 TRIB2Q92519 343 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 RUBCNQ92622 972 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 SNX27Q96L92 541 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 MTRF1LQ9UGC7 380 aaKnown RBP13.23□□□□□ -0.29
LIMK1-201ENST00000336180 NRCAMQ92823 1304 aa13.23□□□□□ -0.29
LIMK1-201ENST00000336180 C17orf102A2RUQ5 167 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PPFIA2O75334 1257 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 FLT3LGP49771 235 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 CA9Q16790 459 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 ACTL9Q8TC94 416 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 INPP5FQ9Y2H2 1132 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 IPPQ9Y573 584 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 HEY1Q9Y5J3 304 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 ANK1P16157 1881 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 GRIN2DO15399 1336 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 CASTOR2A6NHX0 329 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 MED7O43513 233 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PSTPIP1O43586 416 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 MLH1P40692 756 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 MYO1EQ12965 1108 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 CYP1B1Q16678 543 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 ARMCX6Q7L4S7 300 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 EXD1Q8NHP7 514 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 GAD1Q99259 594 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 NFKBIZQ9BYH8 718 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PPME1Q9Y570 386 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 F8W810 466 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PODXLO00592 558 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 IVDP26440 423 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 CDH6P55285 790 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PITX1P78337 314 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-201ENST00000336180 PRKCZQ05513 592 aa13.22□□□□□ -0.29
LIMK1-201ENST00000336180 BYSLQ13895 437 aaKnown RBP13.22□□□□□ -0.29
LIMK1-201ENST00000336180 C9orf57Q5W0N0 161 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms