RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OPTNQ96CV9 577 aa14.58□□□□□ -0.07
SF1-202ENST00000334944 MRRFQ96E11 262 aaKnown RBP14.58□□□□□ -0.07
SF1-202ENST00000334944 IFT43Q96FT9 208 aa14.58□□□□□ -0.07
SF1-202ENST00000334944 RAB3IPQ96QF0 476 aaPredicted RBP14.58□□□□□ -0.07
SF1-202ENST00000334944 OSBPL8Q9BZF1 889 aa14.58□□□□□ -0.07
SF1-202ENST00000334944 CISHQ9NSE2 258 aa14.58□□□□□ -0.07
SF1-202ENST00000334944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.58□□□□□ -0.07
SF1-202ENST00000334944 IVNS1ABPQ9Y6Y0 642 aa14.58□□□□□ -0.07
SF1-202ENST00000334944 IGKV6D-21A0A0A0MT36 114 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 IMPDH2P12268 514 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 USP46P62068 366 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 DYNLT1P63172 113 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 GPAT2Q6NUI2 795 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 LRRC8CQ8TDW0 803 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 SCG3Q8WXD2 468 aaKnown RBP14.58□□□□□ -0.08
SF1-202ENST00000334944 SPATA33Q96N06 139 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 PLVAPQ9BX97 442 aa14.58□□□□□ -0.08
SF1-202ENST00000334944 HNRNPRO43390 633 aaKnown RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 MAFO75444 373 aaPredicted RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 KRT36O76013 467 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ITGBL1O95965 494 aaPredicted RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 NUDT17P0C025 328 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ZNF252P-AS1Q0IIN9 211 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 PTP4A2Q12974 167 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 TRPC3Q13507 836 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 CLUL1Q15846 466 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 KCNT1Q5JUK3 1230 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 C6orf118Q5T5N4 469 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 SNX30Q5VWJ9 437 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 CYP4F22Q6NT55 531 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 DCUN1D2Q6PH85 259 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 VSTM1Q6UX27 236 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 METTL7BQ6UX53 244 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 RIOX2Q8IUF8 465 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 SULF1Q8IWU6 871 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ZNF333Q96JL9 665 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 FHDC1Q9C0D6 1143 aaPredicted RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 AVENQ9NQS1 362 aaPredicted RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 ZBTB42B2RXF5 422 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 TOM1L1O75674 476 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 PIAS1O75925 651 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 IQCF3P0C7M6 154 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 CXCL8P10145 99 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ATF2P15336 505 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ACADSP16219 412 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 IVDP26440 423 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 STX2P32856 288 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 MCCD1P59942 119 aaPredicted RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 RCN1Q15293 331 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ACBD5Q5T8D3 534 aaPredicted RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 FAM160B1Q5W0V3 765 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 RHOT1Q8IXI2 618 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■■■□ 21.6
SF1-202ENST00000334944 GPC2Q8N158 579 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ETNK2Q9NVF9 386 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 BRCA2P51587 3418 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 FAM189A1O60320 539 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 LDHAP00338 332 aaKnown RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 RARGP13631 454 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 CCNB1P14635 433 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 DBN1Q16643 649 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 MAPK6Q16659 721 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ZNF568Q3ZCX4 644 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 MFSD7Q6UXD7 560 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 DSTYKQ6XUX3 929 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 GPR20Q99678 358 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ACO2Q99798 780 aaKnown RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 YIPF2Q9BWQ6 316 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 MRPL4Q9BYD3 311 aaKnown RBP14.57□□□□□ -0.08
SF1-202ENST00000334944 SLCO1B3Q9NPD5 702 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 RNF19AQ9NV58 838 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 ANAPC5Q9UJX4 755 aa14.57□□□□□ -0.08
SF1-202ENST00000334944 SOCS7O14512 581 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 ASS1P00966 412 aaKnown RBP14.56□□□□□ -0.08
SF1-202ENST00000334944 FUT4P22083 530 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 CNPY1Q3B7I2 92 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 EAPPQ56P03 285 aaPredicted RBP14.56□□□□□ -0.08
SF1-202ENST00000334944 ZNF365Q70YC5 407 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 BRSK2Q8IWQ3 736 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 EMC1Q8N766 993 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 FEZF2Q8TBJ5 459 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 RNPEPQ9H4A4 650 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 PARP2Q9UGN5 583 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 DNPEPQ9ULA0 475 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 BRCA1P38398 1863 aaKnown RBP14.56□□□□□ -0.08
SF1-202ENST00000334944 EVPLQ92817 2033 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 PIGRP01833 764 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 KRT1P04264 644 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 TMEM191BP0C7N4 346 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 ZNF699Q32M78 642 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 SH3D19Q5HYK7 790 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 NOL9Q5SY16 702 aaKnown RBP14.56□□□□□ -0.08
SF1-202ENST00000334944 ZNF677Q86XU0 584 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 WDTC1Q8N5D0 677 aa14.56□□□□□ -0.08
SF1-202ENST00000334944 C12orf50Q8NA57 414 aaPredicted RBP14.56□□□□□ -0.08
SF1-202ENST00000334944 SNRNP27Q8WVK2 155 aaKnown RBP14.56□□□□□ -0.08
SF1-202ENST00000334944 DCPSQ96C86 337 aaKnown RBP14.56□□□□□ -0.08
SF1-202ENST00000334944 SNF8Q96H20 258 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms