RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 SUPT20HL1Q3ZLR7 823 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 CFAP157Q5JU67 520 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 ULK2Q8IYT8 1036 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 MIS12Q9H081 205 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 KLHL11Q9NVR0 708 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 ZNF536O15090 1300 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 BUD23O43709 281 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 GAS7O60861 476 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 TM7SF2O76062 418 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 ENO1P06733 434 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 IMPDH2P12268 514 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 BGNP21810 368 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 PHBP35232 272 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 GPC3P51654 580 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 NFX1Q12986 1120 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 ALCAMQ13740 583 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 HNRNPDQ14103 355 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 KAZNQ674X7 775 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 KRT39Q6A163 491 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 DPY19L2Q6NUT2 758 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 RAPH1Q70E73 1250 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 NME8Q8N427 588 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.96■□□□□ 0.635e-14■■■□□ 15.6
CLSTN3-202ENST00000331148 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 CLPTM1LQ96KA5 538 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 CYTH2Q99418 400 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 GPAMQ9HCL2 828 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 PICK1Q9NRD5 415 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 MYPNQ86TC9 1320 aa18.96■□□□□ 0.63
CLSTN3-202ENST00000331148 DENND3A2RUS2 1198 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 CAPN14A8MX76 684 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 GOLGA8SH3BPF8 625 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 GOLGA8MH3BSY2 632 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 KRT10P13645 584 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 SSTR1P30872 391 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 HIF1AQ16665 826 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 DRICH1Q6PGQ1 229 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 NLRX1Q86UT6 975 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 TREML1Q86YW5 311 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 ATP11CQ8NB49 1132 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 DCAKDQ8WVC6 231 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 LXNQ9BS40 222 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 AS3MTQ9HBK9 375 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 GALNT8Q9NY28 637 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 USTQ9Y2C2 406 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 RPS6KL1Q9Y6S9 549 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 POLR2AP24928 1970 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 RBBP6Q7Z6E9 1792 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 FAM237BA0A1B0GVD1 139 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 PI4K2BG5E9Z4 385 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 SPP2Q13103 211 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 MTMR2Q13614 643 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 KLHL38Q2WGJ6 581 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 SPATA24Q86W54 205 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 CBWD2Q8IUF1 395 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 KLRG1Q96E93 195 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 ACSS3Q9H6R3 686 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 DNAAF2Q9NVR5 837 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 SLC7A8Q9UHI5 535 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 POLIQ9UNA4 740 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 FZD1Q9UP38 647 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 COQ4Q9Y3A0 265 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 DOCK1Q14185 1865 aa18.95■□□□□ 0.62
CLSTN3-202ENST00000331148 A6NJR5 290 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 LPXNO60711 386 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 IL1BP01584 269 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 PTPRAP18433 802 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 CCNFP41002 786 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 GRIA2P42262 883 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 ETV4P43268 484 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 NSFP46459 744 aaKnown RBP18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 TMCO4Q5TGY1 634 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 RBM12BQ8IXT5 1001 aaKnown RBP18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 OR6Y1Q8NGX8 325 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 TAS1R2Q8TE23 839 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 TTC17Q96AE7 1141 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 CCDC127Q96BQ5 260 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 HIC2Q96JB3 615 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 UNC45AQ9H3U1 944 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 ETNK2Q9NVF9 386 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 MRPL11Q9Y3B7 192 aaKnown RBP18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 SMCHD1A6NHR9 2005 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 OPHN1O60890 802 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 VAV1P15498 845 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 C1orf146Q5VVC0 180 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 PADI6Q6TGC4 694 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 MON1BQ7L1V2 547 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 PYROXD1Q8WU10 500 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 FAM111AQ96PZ2 611 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 THTPAQ9BU02 230 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 TMEM8AQ9HCN3 771 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 TOPORSQ9NS56 1045 aaPredicted RBP18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 ZDHHC7Q9NXF8 308 aa18.94■□□□□ 0.62
CLSTN3-202ENST00000331148 E5RJQ4 531 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 MAPTP10636 758 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 PIM1P11309 404 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 HARSP12081 509 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 INHBCP55103 352 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms