RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 TRPC5OSA6NMA1 111 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 ACADSBP45954 432 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 AQP5P55064 265 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 RPS6P62753 249 aaKnown RBP16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 IFI35P80217 286 aaPredicted RBP16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 MRPS15P82914 257 aaKnown RBP16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 PDAP1Q13442 181 aaKnown RBP16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 SPDYCQ5MJ68 293 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 NT5DC3Q86UY8 548 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 ACER1Q8TDN7 264 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 ZKSCAN4Q969J2 545 aaPredicted RBP16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 NDFIP2Q9NV92 336 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 PCDHGC5Q9Y5F6 944 aa16.52■□□□□ 0.24
MCF2L2-201ENST00000328913 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 MYO1DO94832 1006 aa16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 RPL21P46778 160 aaKnown RBP16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 TTC33Q6PID6 262 aaPredicted RBP16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 ATPAF2Q8N5M1 289 aa16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 APPL2Q8NEU8 664 aa16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 CNDP1Q96KN2 507 aa16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 ZC4H2Q9NQZ6 224 aa16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 DCDC2Q9UHG0 476 aa16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 SLIT1O75093 1534 aa16.52■□□□□ 0.23
MCF2L2-201ENST00000328913 CELF2O95319 508 aaKnown RBP16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 FDFT1P37268 417 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 TMED10P49755 219 aaKnown RBP16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 TGFB2P61812 414 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 ATF7IP2Q5U623 682 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 USP33Q8TEY7 942 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 CNBD2Q96M20 576 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 NAT9Q9BTE0 207 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 RIOX1Q9H6W3 641 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 TEKT2Q9UIF3 430 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 PIK3CDO00329 1044 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 CDC42EP1Q00587 391 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 ANO4Q32M45 955 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 TTMPQ5BVD1 217 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 UBA3Q8TBC4 463 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 EFCAB1Q9HAE3 211 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 PCDHGB4Q9UN71 923 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 MAGEB2O15479 319 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 PLOD1Q02809 727 aaPredicted RBP16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 NAPEPLDQ6IQ20 393 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 LAYNQ6UX15 382 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 IZUMO2Q6UXV1 221 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 CD302Q8IX05 232 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 JADE3Q92613 823 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 PPP1R2P1Q96PQ5 205 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 TEX12Q9BXU0 123 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 CASS4Q9NQ75 786 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 LRCH1Q9Y2L9 728 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 M0R3G1 203 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 RECQLP46063 649 aaPredicted RBP16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 KBTBD12Q3ZCT8 623 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 NAIF1Q69YI7 327 aaPredicted RBP16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 PRPF18Q99633 342 aaKnown RBP16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 TMEM121Q9BTD3 319 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 ZNF212Q9UDV6 495 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 SHOC2Q9UQ13 582 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 RPS6KL1Q9Y6S9 549 aa16.51■□□□□ 0.23
MCF2L2-201ENST00000328913 BMP6P22004 513 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 TNFRSF8P28908 595 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 PLD3Q8IV08 490 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 AFG1LQ8WV93 481 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 DDX3XO00571 662 aaKnown RBP eCLIP16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 SLC44A4Q53GD3 710 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 IER5Q5VY09 327 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 SLC47A2Q86VL8 602 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 TAS1R2Q8TE23 839 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 SLC5A5Q92911 643 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 ZNF518BQ9C0D4 1074 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 GGA2Q9UJY4 613 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 ATP9AO75110 1047 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 PDGFRBP09619 1106 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 GARTP22102 1010 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 CXCL9Q07325 125 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 EFHC1Q5JVL4 640 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 SNX30Q5VWJ9 437 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 PCNX4Q63HM2 1172 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 SPOCD1Q6ZMY3 1216 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 PNMA5Q96PV4 448 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 ITSN1Q15811 1721 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 SLC35C1Q96A29 364 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 KATNAL1Q9BW62 490 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 SEPT3Q9UH03 358 aa16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
MCF2L2-201ENST00000328913 GRK2P25098 689 aa16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 KCNT1Q5JUK3 1230 aa16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 SZRD1Q7Z422 152 aa16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 TMPRSS6Q8IU80 811 aa16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 SHCBP1Q8NEM2 672 aa16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 TFB1MQ8WVM0 346 aaKnown RBP16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 RTFDC1Q9BY42 306 aaPredicted RBP16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 PCDH9Q9HC56 1237 aa16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 GPRC5CQ9NQ84 441 aa16.49■□□□□ 0.23
MCF2L2-201ENST00000328913 PRMT7Q9NVM4 692 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms