RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ROR1Q01973 937 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 SMAD4Q13485 552 aaKnown RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 ARHGAP44Q17R89 818 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 HABP4Q5JVS0 413 aaKnown RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 TMCO4Q5TGY1 634 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 SYCE1Q8N0S2 351 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 OTUB2Q96DC9 234 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 PPP1R9BQ96SB3 815 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 HSD3B7Q9H2F3 369 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 APOBEC3GQ9HC16 384 aaKnown RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 ASAH2Q9NR71 780 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 TSC2P49815 1807 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 M0QYV0 167 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 H2AFZP0C0S5 128 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 CYP11B1P15538 503 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 ARHGAP25P42331 645 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 RPL34P49207 117 aaKnown RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 GOLGA7BQ2TAP0 167 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 ATAT1Q5SQI0 421 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 PLPP4Q5VZY2 271 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 LMBRD2Q68DH5 695 aaPredicted RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 SCARA5Q6ZMJ2 495 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 H2AFVQ71UI9 128 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 CCDC186Q7Z3E2 898 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 MON1AQ86VX9 555 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 ERICH1Q86X53 443 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 PSTKQ8IV42 348 aaKnown RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 SLC4A11Q8NBS3 891 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 KBTBD7Q8WVZ9 684 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 CTNNBL1Q8WYA6 563 aaPredicted RBP5.46□□□□□ -1.54
LRIT3-201ENST00000327908 MYRFLQ96LU7 910 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 GPR62Q9BZJ7 368 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 PRKD2Q9BZL6 878 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 PIDD1Q9HB75 910 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 SCML2Q9UQR0 700 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 YIPF1Q9Y548 306 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 INSL5Q9Y5Q6 135 aa5.46□□□□□ -1.54
LRIT3-201ENST00000327908 HSF2BPO75031 334 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CST3P01034 146 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 YWHAQP27348 245 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MAN1A1P33908 653 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 OR1D2P34982 312 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 GRIK1P39086 918 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 GATMP50440 423 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 EPHA5P54756 1037 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CLEC16AQ2KHT3 1053 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 SLC39A12Q504Y0 691 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MDH1BQ5I0G3 518 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 SNX30Q5VWJ9 437 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ACAD10Q6JQN1 1059 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 PHLDB3Q6NSJ2 640 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ANKRD54Q6NXT1 300 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 LILRA6Q6PI73 481 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CD300LGQ6UXG3 332 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 OTOP3Q7RTS5 596 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 FNIP1Q8TF40 1166 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 BAP1Q92560 729 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ACSF2Q96CM8 615 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 TRIM44Q96DX7 344 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 KREMEN1Q96MU8 473 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MRPL45Q9BRJ2 306 aaKnown RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CRACR2AQ9BSW2 395 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ABHD10Q9NUJ1 306 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 GDE1Q9NZC3 331 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 IL37Q9NZH6 218 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CD207Q9UJ71 328 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 LSM7Q9UK45 103 aaKnown RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 POLIQ9UNA4 740 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 COLQQ9Y215 455 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 USTQ9Y2C2 406 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 HBS1LQ9Y450 684 aaKnown RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CDY1Q9Y6F8 540 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 GABRB2P47870 512 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CYP27A1Q02318 531 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CENPCQ03188 943 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ARHGEF19Q8IW93 802 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 RNF139Q8WU17 664 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ZNF606Q8WXB4 792 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 TATDN2Q93075 761 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 PKMYT1Q99640 499 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 BAG1Q99933 345 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 C17orf80Q9BSJ5 609 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CYP4F11Q9HBI6 524 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 KRT82Q9NSB4 513 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ABCC13Q9NSE7 274 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 PARVAQ9NVD7 372 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MYO1AQ9UBC5 1043 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 GTF3C4Q9UKN8 822 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 PTPRSQ13332 1948 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MEIS3P2A8K0S8 358 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 RBAK-RBAKDNI3L0D1 243 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 TEX28O15482 410 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MEFVO15553 781 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 DAB1O75553 588 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 USP17L7P0C7H9 530 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 TMEM253P0C7T8 217 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 LINC00271P0C7V0 271 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CD58P19256 250 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 SLC1A1P43005 524 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms