RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	ARF4	P18085	180 aa	Predicted RBP	12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	FNTA	P49354	379 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	COBLL1	Q53SF7	1204 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	BZW1	Q7L1Q6	419 aa	Known RBP	12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	TMC3	Q7Z5M5	1100 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	SLC2A14	Q8TDB8	520 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	HDAC11	Q96DB2	347 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	TTC25	Q96NG3	672 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	PGLYRP2	Q96PD5	576 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	NPHS2	Q9NP85	383 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	PCMTD2	Q9NV79	361 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	ZFAT	Q9P243	1243 aa		12.36	□□□□□ -0.43
DDR1-223	ENST00000324771	FOXO6	A8MYZ6	492 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	MAF	O75444	373 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	BANF1	O75531	89 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	AGT	P01019	485 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	ESRRA	P11474	423 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	MIP	P30301	263 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	EPHB1	P54762	984 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	ZNF844	Q08AG5	666 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	ASPH	Q12797	758 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	PTGIS	Q16647	500 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SPATS2	Q86XZ4	545 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.35	□□□□□ -0.43	2e-8	■■□□□ 13.3
DDR1-223	ENST00000324771	KCNV2	Q8TDN2	545 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	CYTH2	Q99418	400 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	ACO2	Q99798	780 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	KIF9	Q9HAQ2	790 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	TXNRD2	Q9NNW7	524 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	KCNK1	O00180	336 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	FAM200B	P0CF97	657 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SLC26A2	P50443	739 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	MARS	P56192	900 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	BIRC2	Q13490	618 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	MAMLD1	Q13495	774 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	MGAT5B	Q3V5L5	792 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	NUDCD3	Q8IVD9	361 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	RAB3IL1	Q8TBN0	382 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	RSRC1	Q96IZ7	334 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	MBOAT7	Q96N66	472 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	ATRNL1	Q5VV63	1379 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	CNTRL	Q7Z7A1	2325 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SPEF2	Q9C093	1822 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	EEF2K	O00418	725 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SYF2	O95926	243 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	KRT4	P19013	534 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	PML	P29590	882 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	CPT1A	P50416	773 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	MMRN1	Q13201	1228 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SNCB	Q16143	134 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	KLHL38	Q2WGJ6	581 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	NPNT	Q6UXI9	565 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	DENND5B	Q6ZUT9	1274 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	ADGRF2	Q8IZF7	708 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	FBXO36	Q8NEA4	188 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	LPP	Q93052	612 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	FAM136A	Q96C01	138 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SEC16B	Q96JE7	1060 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SARS2	Q9NP81	518 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	BTBD19	C9JJ37	291 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	PLA2G6	O60733	806 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	PECAM1	P16284	738 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	ETFB	P38117	255 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	PPIL2	Q13356	520 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	HELQ	Q8TDG4	1101 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	CELF6	Q96J87	481 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	GPR20	Q99678	358 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	TRIM55	Q9BYV6	548 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	DCLK3	Q9C098	648 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	TMBIM4	Q9HC24	238 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	SIX2	Q9NPC8	291 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	FAM8A1	Q9UBU6	413 aa		12.35	□□□□□ -0.43
DDR1-223	ENST00000324771	URB1	O60287	2271 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771		A0A0B4J269	797 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	SCAMP3	O14828	347 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	PMPCB	O75439	489 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	ARIH2	O95376	493 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	RARG	P13631	454 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	ZNF280A	P59817	542 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	TTMP	Q5BVD1	217 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	GLB1L	Q6UWU2	654 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	MYCBPAP	Q8TBZ2	947 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	GLT1D1	Q96MS3	346 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	LRRC37B	Q96QE4	947 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	B3GNT5	Q9BYG0	378 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	DIAPH2	O60879	1101 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	AMPD1	P23109	780 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	RGS2	P41220	211 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	C1QBP	Q07021	282 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	ADIG	Q0VDE8	80 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	PTK7	Q13308	1070 aa		12.34	□□□□□ -0.43
DDR1-223	ENST00000324771	BMPR2	Q13873	1038 aa		12.34	□□□□□ -0.43

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