RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 RARRES1P49788 294 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 LIG3P49916 1009 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 GTF2A1P52655 376 aaPredicted RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 ZSCAN26Q16670 478 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SLC30A10Q6XR72 485 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 ZDHHC17Q8IUH5 632 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SMARCD1Q96GM5 515 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 KAZALD1Q96I82 304 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SERPINB11Q96P15 392 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 NEUROG2Q9H2A3 272 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SF3B1O75533 1304 aaKnown RBP eCLIP9.33□□□□□ -0.92
CD28-201ENST00000324106 OPHN1O60890 802 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 ATP5HO75947 161 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SLC9A1P19634 815 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CNTN2Q02246 1040 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CENPCQ03188 943 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 PDCLQ13371 301 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 C3orf67Q6ZVT6 689 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 DDX42Q86XP3 938 aaKnown RBP eCLIP9.33□□□□□ -0.92
CD28-201ENST00000324106 CBWD2Q8IUF1 395 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 C1orf131Q8NDD1 294 aaKnown RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 TFB1MQ8WVM0 346 aaKnown RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 RUBCNQ92622 972 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 TMEM176AQ96HP8 235 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 ERGIC2Q96RQ1 377 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CNPY3Q9BT09 278 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 FRMD3A2A2Y4 597 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 ACAD10Q6JQN1 1059 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 KRT80Q6KB66 452 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 ZNF720Q7Z2F6 126 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SLFN11Q7Z7L1 901 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 VSIG10LQ86VR7 867 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 BHMTQ93088 406 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 RANBP17Q9H2T7 1088 aaKnown RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 YY1AP1Q9H869 796 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 ECT2Q9H8V3 914 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 SNTG2Q9NY99 539 aa9.33□□□□□ -0.92
CD28-201ENST00000324106 BARX2Q9UMQ3 279 aaPredicted RBP9.33□□□□□ -0.92
CD28-201ENST00000324106 HNRNPCL2B2RXH8 293 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 HNRNPCL1O60812 293 aaKnown RBP9.32□□□□□ -0.92
CD28-201ENST00000324106 GNRH1P01148 92 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 FLT3LGP49771 235 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 ANXA11P50995 505 aaKnown RBP9.32□□□□□ -0.92
CD28-201ENST00000324106 TGM3Q08188 693 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 GRB10Q13322 594 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 CCDC157Q569K6 752 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 PI4K2AQ9BTU6 479 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 PARD6BQ9BYG5 372 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 NDEL1Q9GZM8 345 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 DDX4Q9NQI0 724 aaKnown RBP9.32□□□□□ -0.92
CD28-201ENST00000324106 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.32□□□□□ -0.92
CD28-201ENST00000324106 TRIM66O15016 1216 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 NCKAP1LP55160 1127 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 HPCAP84074 193 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 AMHR2Q16671 573 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 CELF3Q5SZQ8 465 aaKnown RBP9.32□□□□□ -0.92
CD28-201ENST00000324106 GAS2L3Q86XJ1 694 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 LZTR1Q8N653 840 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 CPB2Q96IY4 423 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 RUBCNLQ9H714 662 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 CPSF2Q9P2I0 782 aaKnown RBP9.32□□□□□ -0.92
CD28-201ENST00000324106 SLC39A10Q9ULF5 831 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 HPS5Q9UPZ3 1129 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 CAPN15O75808 1086 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 CRTAMO95727 393 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 GZMAP12544 262 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 CYP24A1Q07973 514 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 TP53BP2Q13625 1128 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 MDH1BQ5I0G3 518 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 DEFB118Q96PH6 123 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.32□□□□□ -0.92
CD28-201ENST00000324106 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.32□□□□□ -0.92
CD28-201ENST00000324106 CAPN7Q9Y6W3 813 aa9.32□□□□□ -0.92
CD28-201ENST00000324106 A0A0G2JND7 137 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 FAM47DPA6NHR8 397 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 CCDC22O60826 627 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 PHF2O75151 1096 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 SOAT2O75908 522 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 SKP1P63208 163 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 GIT2Q14161 759 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 ZNF438Q7Z4V0 828 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 FAM9CQ8IZT9 166 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 SLC25A41Q8N5S1 370 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 MSL3Q8N5Y2 521 aaKnown RBP9.31□□□□□ -0.92
CD28-201ENST00000324106 IGFLR1Q9H665 355 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 C20orf96Q9NUD7 363 aaPredicted RBP9.31□□□□□ -0.92
CD28-201ENST00000324106 INTS13Q9NVM9 706 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 RIC8BQ9NVN3 520 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 CD274Q9NZQ7 290 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 TRMT6Q9UJA5 497 aaKnown RBP9.31□□□□□ -0.92
CD28-201ENST00000324106 TSR3Q9UJK0 312 aaKnown RBP9.31□□□□□ -0.92
CD28-201ENST00000324106 ANGPTL2Q9UKU9 493 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 CCDC78A2IDD5 438 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 DIAPH2O60879 1101 aa9.31□□□□□ -0.92
CD28-201ENST00000324106 RHOBTB1O94844 696 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms