RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FUT2Q10981 343 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 CPLX2Q6PUV4 134 aaKnown RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 CCDC60Q8IWA6 550 aaPredicted RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 CKAP2LQ8IYA6 745 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 ELOA2Q8IYF1 753 aaPredicted RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 KIAA1958Q8N8K9 716 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 HDAC11Q96DB2 347 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 SH3GLB2Q9NR46 395 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 MYH9P35579 1960 aaKnown RBP7.24□□□□□ -1.25
CSTF3-201ENST00000323959 KLF18A0A0U1RQI7 1052 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 A0A1B0GTQ1 180 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 A0A1B0GVT2 93 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 ZBTB43O43298 467 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 SEMA7AO75326 666 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 MPOP05164 745 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 PRF1P14222 555 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 U2AF2P26368 475 aaKnown RBP eCLIP7.24□□□□□ -1.255e-7■■■■□ 24.6
CSTF3-201ENST00000323959 CDC25CP30307 473 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 PTGER4P35408 488 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 DNM2P50570 870 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 UBE2HP62256 183 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 KIF19Q2TAC6 998 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 KDM7AQ6ZMT4 941 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 RSRC2Q7L4I2 434 aaKnown RBP7.24□□□□□ -1.25
CSTF3-201ENST00000323959 IQCA1Q86XH1 822 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 LRRC71Q8N4P6 559 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 ALLCQ8N6M5 410 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 TTC13Q8NBP0 860 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 FBXO18Q8NFZ0 1043 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 ZMYND15Q9H091 742 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 NRBP2Q9NSY0 501 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 PKD2L1Q9P0L9 805 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 PCDHB1Q9Y5F3 818 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 A0A0A0MRY4 1105 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 FAM237AA0A1B0GTK4 181 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 ERICH2A1L162 156 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 FAM221AA4D161 298 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 hCG_1984214I3L0E3 225 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 PRPF3O43395 683 aaKnown RBP7.24□□□□□ -1.25
CSTF3-201ENST00000323959 WIPF1O43516 503 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 GNLYP22749 145 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 CD6P30203 668 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 OXTRP30559 389 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 ADD1P35611 737 aaKnown RBP7.24□□□□□ -1.25
CSTF3-201ENST00000323959 KLRB1Q12918 225 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 MCEMP1Q8IX19 187 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 ZNF713Q8N859 430 aaPredicted RBP7.24□□□□□ -1.25
CSTF3-201ENST00000323959 PNMA1Q8ND90 353 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 C1orf216Q8TAB5 229 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 VAT1LQ9HCJ6 419 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 LATS2Q9NRM7 1088 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 ACSL6Q9UKU0 697 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 CFAP45Q9UL16 551 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 YIPF1Q9Y548 306 aa7.24□□□□□ -1.25
CSTF3-201ENST00000323959 TMEM131Q92545 1883 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 HIVEP3Q5T1R4 2406 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 A0A087WZ62 844 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 DEXIO95424 95 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 CTSKP43235 329 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 IFNAR2P48551 515 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 NASPP49321 788 aaPredicted RBP7.23□□□□□ -1.25
CSTF3-201ENST00000323959 BORAQ6PGQ7 559 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 PPP4R3CPQ6ZMV5 832 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 RBM43Q6ZSC3 357 aaKnown RBP7.23□□□□□ -1.25
CSTF3-201ENST00000323959 ITIH5Q86UX2 942 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 FAM114A1Q8IWE2 563 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 EFCAB3Q8N7B9 438 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 C9orf43Q8TAL5 461 aaPredicted RBP7.23□□□□□ -1.25
CSTF3-201ENST00000323959 OSCP1Q8WVF1 389 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 SLC46A1Q96NT5 459 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 FDXACB1Q9BRP7 624 aaPredicted RBP7.23□□□□□ -1.25
CSTF3-201ENST00000323959 OXCT2Q9BYC2 517 aaPredicted RBP7.23□□□□□ -1.25
CSTF3-201ENST00000323959 RCOR1Q9UKL0 485 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 CYP8B1Q9UNU6 501 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 SNX11Q9Y5W9 270 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 CCDC69A6NI79 296 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 GOLGA8BA8MQT2 603 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 NCAM1P13591 858 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 GNAQP50148 359 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 KRT85P78386 507 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 CTDSPL2Q05D32 466 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 DNAJC3Q13217 504 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 SYNE3Q6ZMZ3 975 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 TAOK1Q7L7X3 1001 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 ZNF654Q8IZM8 581 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 NECAB1Q8N987 351 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 UROC1Q96N76 676 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 ATXN3LQ9H3M9 355 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 KAT14Q9H8E8 782 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 AGO4Q9HCK5 861 aaKnown RBP7.23□□□□□ -1.25
CSTF3-201ENST00000323959 ITGB1BP2Q9UKP3 347 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 SLC12A7Q9Y666 1083 aa7.23□□□□□ -1.25
CSTF3-201ENST00000323959 ZFHX3Q15911 3703 aa7.22□□□□□ -1.25
CSTF3-201ENST00000323959 METTL12A8MUP2 240 aa7.22□□□□□ -1.25
CSTF3-201ENST00000323959 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.22□□□□□ -1.25
CSTF3-201ENST00000323959 H0Y8X5 98 aa7.22□□□□□ -1.25
CSTF3-201ENST00000323959 IFIT3O14879 490 aaKnown RBP7.22□□□□□ -1.25
CSTF3-201ENST00000323959 MTSS1O43312 755 aa7.22□□□□□ -1.25
CSTF3-201ENST00000323959 USP12O75317 370 aa7.22□□□□□ -1.25
CSTF3-201ENST00000323959 YEATS4O95619 227 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms