RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ARMCX2Q7L311 632 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 ZBED8Q8IZ13 594 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 KIAA0319LQ8IZA0 1049 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 RSAD2Q8WXG1 361 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 GRAMD1AQ96CP6 724 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 ZBTB10Q96DT7 871 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 CDCA5Q96FF9 252 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 FDXACB1Q9BRP7 624 aaPredicted RBP23.47■■□□□ 1.35
PNKP-201ENST00000322344 VPS37BQ9H9H4 285 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 FETUBQ9UGM5 382 aa23.47■■□□□ 1.35
PNKP-201ENST00000322344 FOXO6A8MYZ6 492 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 M0QYV0 167 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 PRPF4O43172 522 aaKnown RBP eCLIP23.46■■□□□ 1.356e-7■■■■□ 23.2
PNKP-201ENST00000322344 ATP2C2O75185 946 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 PCK1P35558 622 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 ARL4CP56559 192 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 DYNLT1P63172 113 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 PDIA2Q13087 525 aaKnown RBP23.46■■□□□ 1.35
PNKP-201ENST00000322344 TMEM132DQ14C87 1099 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 HIF1AQ16665 826 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 NT5DC4Q86YG4 428 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 KCTD6Q8NC69 237 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 GDAP1Q8TB36 358 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 GTF3C2Q8WUA4 911 aaPredicted RBP23.46■■□□□ 1.35
PNKP-201ENST00000322344 OPTNQ96CV9 577 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 ITGA11Q9UKX5 1188 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 SMG5Q9UPR3 1016 aaKnown RBP23.46■■□□□ 1.35
PNKP-201ENST00000322344 ZSWIM8A7E2V4 1837 aa23.46■■□□□ 1.35
PNKP-201ENST00000322344 GH1P01241 217 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 PHBP35232 272 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 GPD2P43304 727 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 CTCFP49711 727 aaPredicted RBP23.45■■□□□ 1.35
PNKP-201ENST00000322344 INCA1Q0VD86 236 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 KCNT1Q5JUK3 1230 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 SPATA21Q7Z572 469 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 RFX6Q8HWS3 928 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 EMC1Q8N766 993 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 GBP7Q8N8V2 638 aaPredicted RBP23.45■■□□□ 1.35
PNKP-201ENST00000322344 HPDLQ96IR7 371 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 RSAD1Q9HA92 442 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 HMGXB4Q9UGU5 601 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 ARL2BPQ9Y2Y0 163 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 C2CD2Q9Y426 696 aa23.45■■□□□ 1.35
PNKP-201ENST00000322344 APOC4-APOC2K7ER74 178 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 TRUB2O95900 331 aaKnown RBP23.45■■□□□ 1.34
PNKP-201ENST00000322344 APOC2P02655 101 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 MIPP30301 263 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 FASTKD3Q14CZ7 662 aaKnown RBP23.45■■□□□ 1.34
PNKP-201ENST00000322344 SLC10A6Q3KNW5 377 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 FUKQ8N0W3 1084 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 HEXIM2Q96MH2 286 aaKnown RBP23.45■■□□□ 1.34
PNKP-201ENST00000322344 ADPGKQ9BRR6 497 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 MLXIPLQ9NP71 852 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 BARX2Q9UMQ3 279 aaPredicted RBP23.45■■□□□ 1.34
PNKP-201ENST00000322344 AKT3Q9Y243 479 aa23.45■■□□□ 1.34
PNKP-201ENST00000322344 POC1B-GALNT4F8VUJ3 575 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 RBP5P82980 135 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 ORC1Q13415 861 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 NAT8LQ8N9F0 302 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 VTA1Q9NP79 307 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 HAUS2Q9NVX0 235 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.44■■□□□ 1.341e-7■■■□□ 14.9
PNKP-201ENST00000322344 USP18Q9UMW8 372 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 AGAP1Q9UPQ3 857 aa23.44■■□□□ 1.34
PNKP-201ENST00000322344 TSHRP16473 764 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 ZNF143P52747 638 aaPredicted RBP23.43■■□□□ 1.34
PNKP-201ENST00000322344 STILQ15468 1287 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 MOB2Q70IA6 237 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 ILDR2Q71H61 639 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 PPTC7Q8NI37 304 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 CPT1BQ92523 772 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 SMC6Q96SB8 1091 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 TRABDQ9H4I3 376 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 PSMC3IPQ9P2W1 217 aaPredicted RBP23.43■■□□□ 1.34
PNKP-201ENST00000322344 MCF2LO15068 1137 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 ARF4P18085 180 aaPredicted RBP23.43■■□□□ 1.34
PNKP-201ENST00000322344 RPL22P35268 128 aaKnown RBP23.43■■□□□ 1.34
PNKP-201ENST00000322344 EFHC2Q5JST6 749 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 FAM102AQ5T9C2 384 aaPredicted RBP23.43■■□□□ 1.34
PNKP-201ENST00000322344 CYB5D1Q6P9G0 228 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 ATP11CQ8NB49 1132 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 EMID1Q96A84 441 aaPredicted RBP23.43■■□□□ 1.34
PNKP-201ENST00000322344 CPB2Q96IY4 423 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 CNPY3Q9BT09 278 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 PCSK1NQ9UHG2 260 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 PNMA3Q9UL41 463 aa23.43■■□□□ 1.34
PNKP-201ENST00000322344 CFAP73A6NFT4 308 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 KRT15P19012 456 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 GPD1P21695 349 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 EIF3EP60228 445 aaKnown RBP23.42■■□□□ 1.34
PNKP-201ENST00000322344 MTFR1Q15390 333 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 TAPT1Q6NXT6 567 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 LCLAT1Q6UWP7 414 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 ACAP3Q96P50 834 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 SAE1Q9UBE0 346 aaPredicted RBP23.42■■□□□ 1.34
PNKP-201ENST00000322344 PRKAG3Q9UGI9 489 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 RBM47A0AV96 593 aaKnown RBP23.42■■□□□ 1.34
PNKP-201ENST00000322344 E7ESA3 106 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 ASMTLO95671 621 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 CD48P09326 243 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms