RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 SFTPA1Q8IWL2 248 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 TMEFF1Q8IYR6 380 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 KCTD17Q8N5Z5 321 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 OLIG1Q8TAK6 271 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 LEO1Q8WVC0 666 aaPredicted RBP21.06■□□□□ 0.96
SSNA1-201ENST00000322310 FNBP1Q96RU3 617 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 FIZ1Q96SL8 496 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 ZHX3Q9H4I2 956 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 L1RE1Q9UN81 338 aa21.06■□□□□ 0.96
SSNA1-201ENST00000322310 FREM2Q5SZK8 3169 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 ATXN2Q99700 1313 aaKnown RBP21.05■□□□□ 0.96
SSNA1-201ENST00000322310 ASCC3Q8N3C0 2202 aaKnown RBP21.05■□□□□ 0.96
SSNA1-201ENST00000322310 ENGP17813 658 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 ZNF131P52739 623 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 SIM1P81133 766 aaPredicted RBP21.05■□□□□ 0.96
SSNA1-201ENST00000322310 GAB4Q2WGN9 574 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 CRELD2Q6UXH1 353 aaPredicted RBP21.05■□□□□ 0.96
SSNA1-201ENST00000322310 CCDC26Q8TAB7 109 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 ZNF560Q96MR9 790 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 NUSAP1Q9BXS6 441 aaKnown RBP21.05■□□□□ 0.96
SSNA1-201ENST00000322310 SLC32A1Q9H598 525 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 ABCB6Q9NP58 842 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 FSCN3Q9NQT6 498 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 DDX43Q9NXZ2 648 aaKnown RBP21.05■□□□□ 0.96
SSNA1-201ENST00000322310 GTF3C4Q9UKN8 822 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 AGO2Q9UKV8 859 aaKnown RBP21.05■□□□□ 0.96
SSNA1-201ENST00000322310 MSRB2Q9Y3D2 182 aa21.05■□□□□ 0.96
SSNA1-201ENST00000322310 TULP1O00294 542 aaPredicted RBP21.04■□□□□ 0.96
SSNA1-201ENST00000322310 HCRTO43612 131 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 NFATC1O95644 943 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 SCP2P22307 547 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 P2RY2P41231 377 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 ZXDBP98169 803 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 GTF2BQ00403 316 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 MESP2Q0VG99 397 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 KCNB1Q14721 858 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 INTS6LQ5JSJ4 861 aaKnown RBP21.04■□□□□ 0.96
SSNA1-201ENST00000322310 SCARA3Q6AZY7 606 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 LPCAT2Q7L5N7 544 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 SCN4BQ8IWT1 228 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 ALLCQ8N6M5 410 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 PKMYT1Q99640 499 aa21.04■□□□□ 0.96
SSNA1-201ENST00000322310 TNFRSF10BO14763 440 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 MAP3K13O43283 966 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 HDCP19113 662 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 POLR2BP30876 1174 aaKnown RBP21.03■□□□□ 0.96
SSNA1-201ENST00000322310 WNT7BP56706 349 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 PIP4P1Q86T03 277 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 SYT12Q8IV01 421 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 TXNDC5Q8NBS9 432 aaKnown RBP21.03■□□□□ 0.96
SSNA1-201ENST00000322310 FAM84AQ96KN4 292 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 ACBD6Q9BR61 282 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 ZDHHC4Q9NPG8 344 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 MBD1Q9UIS9 605 aaPredicted RBP21.03■□□□□ 0.96
SSNA1-201ENST00000322310 ARHGAP26Q9UNA1 814 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 PTPRDP23468 1912 aa21.03■□□□□ 0.96
SSNA1-201ENST00000322310 ITPR1Q14643 2758 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 SGK1O00141 431 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 ALDH1A2O94788 518 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 KRT18P05783 430 aaKnown RBP21.02■□□□□ 0.96
SSNA1-201ENST00000322310 SEMA3BQ13214 749 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 OSTM1Q86WC4 334 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 SPATA2LQ8IUW3 424 aaPredicted RBP21.02■□□□□ 0.96
SSNA1-201ENST00000322310 FSIP1Q8NA03 581 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 IL17RCQ8NAC3 791 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 SPACA7Q96KW9 195 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 BLOC1S4Q9NUP1 217 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 AGAP1Q9UPQ3 857 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 STYXL1Q9Y6J8 313 aa21.02■□□□□ 0.96
SSNA1-201ENST00000322310 TNRC6BQ9UPQ9 1833 aaKnown RBP21.01■□□□□ 0.95
SSNA1-201ENST00000322310 CACNA1EQ15878 2313 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 LAMA5O15230 3695 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 TAF4O00268 1085 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 SCAMP3O14828 347 aaKnown RBP21.01■□□□□ 0.95
SSNA1-201ENST00000322310 HUS1O60921 280 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 KLF8O95600 359 aaPredicted RBP21.01■□□□□ 0.95
SSNA1-201ENST00000322310 CYP17A1P05093 508 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 ITGB3P05106 788 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 CFIP05156 583 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 CHRM1P11229 460 aaPredicted RBP21.01■□□□□ 0.95
SSNA1-201ENST00000322310 TCF3P15923 654 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 TIE1P35590 1138 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 PNPLA4P41247 253 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 SLC6A11P48066 632 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 FAM193AP78312 1265 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 MRPS21P82921 87 aaKnown RBP21.01■□□□□ 0.95
SSNA1-201ENST00000322310 TFAMQ00059 246 aaKnown RBP21.01■□□□□ 0.95
SSNA1-201ENST00000322310 MCM6Q14566 821 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 EMC10Q5UCC4 262 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 MCTP1Q6DN14 999 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 SLFN12LQ6IEE8 588 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 WHAMMQ8TF30 809 aa21.01■□□□□ 0.95
SSNA1-201ENST00000322310 BCCIPQ9P287 314 aaKnown RBP eCLIP21.01■□□□□ 0.95
SSNA1-201ENST00000322310 ANAPC1Q9H1A4 1944 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 LEFTY2O00292 366 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 TBCAO75347 108 aaKnown RBP21■□□□□ 0.95
SSNA1-201ENST00000322310 ITPKAP23677 461 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 ADSSP30520 456 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 MYL7Q01449 175 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 MAP7D1Q3KQU3 841 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms