RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ITGB3BPQ13352 177 aaPredicted RBP17.18■□□□□ 0.34
CLIP4-201ENST00000320081 TRIML2Q8N7C3 387 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 RFWD2Q8NHY2 731 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 FAM129AQ9BZQ8 928 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 WWP1Q9H0M0 922 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 ATXN3LQ9H3M9 355 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
CLIP4-201ENST00000320081 WDR35Q9P2L0 1181 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 NAMPTP43490 491 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 TAP1Q03518 808 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 BTKQ06187 659 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 PRPF39Q86UA1 669 aaKnown RBP17.18■□□□□ 0.34
CLIP4-201ENST00000320081 MIB1Q86YT6 1006 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 TTC30BQ8N4P2 665 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 EFHBQ8N7U6 833 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 EDEM1Q92611 657 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 RUBCNQ92622 972 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 SP110Q9HB58 689 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 EEF2KO00418 725 aaKnown RBP17.18■□□□□ 0.34
CLIP4-201ENST00000320081 GH1P01241 217 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 TPH1P17752 444 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 AP3M2P53677 418 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 PTPN11Q06124 597 aaPredicted RBP17.18■□□□□ 0.34
CLIP4-201ENST00000320081 ACAD11Q709F0 780 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 E2F7Q96AV8 911 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 IFT43Q96FT9 208 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 SERPINB12Q96P63 405 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 ROPN1BQ9BZX4 212 aaPredicted RBP17.18■□□□□ 0.34
CLIP4-201ENST00000320081 ROPN1Q9HAT0 212 aaPredicted RBP17.18■□□□□ 0.34
CLIP4-201ENST00000320081 GDF3Q9NR23 364 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 SENP1Q9P0U3 644 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 AURKCQ9UQB9 309 aa17.18■□□□□ 0.34
CLIP4-201ENST00000320081 XPAP23025 273 aaPredicted RBP17.17■□□□□ 0.34
CLIP4-201ENST00000320081 ELK3P41970 407 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 SLC20A2Q08357 652 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 SEMA4DQ92854 862 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 SLCO1B3Q9NPD5 702 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 KPNA7A9QM74 516 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 OPLAHO14841 1288 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 GARTP22102 1010 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 CHKAP35790 457 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 RNF148Q8N7C7 305 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 CELF6Q96J87 481 aaKnown RBP17.17■□□□□ 0.34
CLIP4-201ENST00000320081 PTPRHQ9HD43 1115 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 DNAJC6O75061 913 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 MYL2P10916 166 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 RFC5P40937 340 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 TRIP10Q15642 601 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 NUP93Q8N1F7 819 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 GRAMD1AQ96CP6 724 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 DCLK3Q9C098 648 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 KRT82Q9NSB4 513 aa17.17■□□□□ 0.34
CLIP4-201ENST00000320081 NDST1P52848 882 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 RPL10AP62906 217 aaKnown RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 AP1ARQ63HQ0 302 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 FASTKD5Q7L8L6 764 aaKnown RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 CXorf38Q8TB03 319 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ASAP3Q8TDY4 903 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 CYP4F12Q9HCS2 524 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 SNTG2Q9NY99 539 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 NINJ2Q9NZG7 142 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 PAK5Q9P286 719 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ADRA1DP25100 572 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 MAP1SQ66K74 1059 aaPredicted RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 SYDE1Q6ZW31 735 aaPredicted RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 POU5F2Q8N7G0 328 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ZNF560Q96MR9 790 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 NEUROG2Q9H2A3 272 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ATP5HO75947 161 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 FGRP09769 529 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ELF1P32519 619 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 CSE1LP55060 971 aaKnown RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 HIC1Q14526 733 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 NPNTQ6UXI9 565 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 USP6NLQ92738 828 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 CGRRF1Q99675 332 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 TUBB6Q9BUF5 446 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 PPME1Q9Y570 386 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ASTN2O75129 1339 aaPredicted RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ZWINTO95229 277 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 ZCCHC18P0CG32 403 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 GFAPP14136 432 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 CENPCQ03188 943 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 PDCD2Q16342 344 aaPredicted RBP17.16■□□□□ 0.34
CLIP4-201ENST00000320081 MPZL3Q6UWV2 235 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 THEM5Q8N1Q8 247 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 PTPRN2Q92932 1015 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 STAMBPL1Q96FJ0 436 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 PCDHB18PQ96TA0 734 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 EPAS1Q99814 870 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 C17orf75Q9HAS0 396 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 KCND1Q9NSA2 647 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 TSPAN16Q9UKR8 245 aa17.16■□□□□ 0.34
CLIP4-201ENST00000320081 RICTORQ6R327 1708 aa17.15■□□□□ 0.34
CLIP4-201ENST00000320081 RGL2O15211 777 aa17.15■□□□□ 0.34
CLIP4-201ENST00000320081 PFDN1O60925 122 aa17.15■□□□□ 0.34
CLIP4-201ENST00000320081 ANP32DO95626 131 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms