RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 GLIS1Q8NBF1 620 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 BEST2Q8NFU1 509 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 IPO4Q8TEX9 1081 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 FNIP1Q8TF40 1166 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 PIWIL1Q96J94 861 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 DDX23Q9BUQ8 820 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 FAM129AQ9BZQ8 928 aa7.97□□□□□ -1.13
IFT88-201ENST00000319980 CDC42EP4Q9H3Q1 356 aaKnown RBP7.97□□□□□ -1.13
IFT88-201ENST00000319980 MANSC4A6NHS7 340 aaPredicted RBP7.96□□□□□ -1.14
IFT88-201ENST00000319980 TNPO2O14787 897 aaKnown RBP7.96□□□□□ -1.14
IFT88-201ENST00000319980 KRT7P08729 469 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 ZSCAN5DPP0CG00 497 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 GABRB2P47870 512 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 COPS2P61201 443 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 ADAM17P78536 824 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 ZBTB6Q15916 424 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 P3H1Q32P28 736 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 SH3PXD2AQ5TCZ1 1133 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 AGBL2Q5U5Z8 902 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 SMYD5Q6GMV2 418 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 OR6B2Q6IFH4 312 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 LCLAT1Q6UWP7 414 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 C17orf99Q6UX52 265 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 POLNQ7Z5Q5 900 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 C7orf31Q8N865 590 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 OR6B3Q8NGW1 331 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 HSPH1Q92598 858 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 MCRS1Q96EZ8 462 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 TMEM121Q9BTD3 319 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 RNF39Q9H2S5 420 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 KIAA1257Q9ULG3 409 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 TULP2O00295 520 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 CST8O60676 142 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 IFNB1P01574 187 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 CD48P09326 243 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 ETS1P14921 441 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 KLRC2P26717 231 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 MIPP30301 263 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 PPP2R2AP63151 447 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 LMNB2Q03252 620 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 TAF5Q15542 800 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 KYNUQ16719 465 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 GOLGA7BQ2TAP0 167 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 IZUMO3Q5VZ72 239 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 PMF1Q6P1K2 205 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 TTC39CQ8N584 583 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 KCTD6Q8NC69 237 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 EPS8L3Q8TE67 593 aaKnown RBP7.96□□□□□ -1.14
IFT88-201ENST00000319980 LPIN3Q9BQK8 851 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 GJD2Q9UKL4 321 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 USP18Q9UMW8 372 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 DERAQ9Y315 318 aa7.96□□□□□ -1.14
IFT88-201ENST00000319980 SMIM28A0A1B0GU29 152 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 C3orf70A6NLC5 250 aaPredicted RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 A8MXQ7 604 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 HAS3O00219 553 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 RGS16O15492 202 aaPredicted RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 HCRTO43612 131 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 PFKMP08237 780 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 PDGFRBP09619 1106 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 PDGFRAP16234 1089 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 KDELR1P24390 212 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 RGS2P41220 211 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 CCT5P48643 541 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 ARSEP51690 589 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 SEC24CP53992 1094 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 GSCP56915 257 aaPredicted RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 CAV1Q03135 178 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 PCBP1Q15365 356 aaKnown RBP eCLIP7.95□□□□□ -1.14
IFT88-201ENST00000319980 FSCN1Q16658 493 aaKnown RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 CDO1Q16878 200 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 C9orf57Q5W0N0 161 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 ALKAL1Q6UXT8 129 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 TRMT10CQ7L0Y3 403 aaKnown RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 SAPCD2Q86UD0 394 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 IFNL1Q8IU54 200 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 USP6NLQ92738 828 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 CALN1Q9BXU9 219 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 TSPYL1Q9H0U9 437 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 GOLGA2P5Q9HBQ8 144 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 PPANQ9NQ55 473 aaKnown RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 CNTN3Q9P232 1028 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 NME7Q9Y5B8 376 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 C17orf102A2RUQ5 167 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 SGK1O00141 431 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 NDUFAB1O14561 156 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 RASGRF2O14827 1237 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 C6orf222P0C671 652 aaPredicted RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 IFI35P80217 286 aaPredicted RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 ATP11AP98196 1134 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 GPS1Q13098 491 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 LONRF1Q17RB8 773 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 SOWAHAQ2M3V2 549 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 C15orf59Q2T9L4 293 aaPredicted RBP7.95□□□□□ -1.14
IFT88-201ENST00000319980 RAB6CQ53S08 254 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 FBXO47Q5MNV8 452 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 C6orf118Q5T5N4 469 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 RGMBQ6NW40 437 aa7.95□□□□□ -1.14
IFT88-201ENST00000319980 FAM183BPQ6ZVS7 135 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms