RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ADARB2Q9NS39 739 aaKnown RBP16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 TXLNGQ9NUQ3 528 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNF148Q9UQR1 794 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 AKT3Q9Y243 479 aa16.34■□□□□ 0.21
SHROOM1-201ENST00000319854 ZBTB42B2RXF5 422 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 GOLGA8MH3BSY2 632 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 OGTO15294 1046 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 CNMDO75829 334 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 PIAS1O75925 651 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 ASS1P00966 412 aaKnown RBP16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 OGDHQ02218 1023 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 LBRQ14739 615 aaKnown RBP16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 DCLK3Q9C098 648 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 MRPL47Q9HD33 250 aaKnown RBP16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 PARP2Q9UGN5 583 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 ANAPC5Q9UJX4 755 aa16.33■□□□□ 0.21
SHROOM1-201ENST00000319854 SOCS7O14512 581 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 RNF8O76064 485 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 GAS8O95995 478 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 PYGLP06737 847 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 TBXAS1P24557 533 aaPredicted RBP16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 POLE2P56282 527 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 CCDC15Q0P6D6 951 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 DNAJC3Q13217 504 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 CLUL1Q15846 466 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 SYCP2LQ5T4T6 812 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 RFWD3Q6PCD5 774 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 MFSD7Q6UXD7 560 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 FEZF2Q8TBJ5 459 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 EPAS1Q99814 870 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 HMGXB4Q9UGU5 601 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 PCSK1NQ9UHG2 260 aa16.33■□□□□ 0.2
SHROOM1-201ENST00000319854 NFICP08651 508 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 ALDH3A1P30838 453 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 ACVR2BQ13705 512 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 SGSM1Q2NKQ1 1148 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 IER5Q5VY09 327 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 ENDOVQ8N8Q3 282 aaKnown RBP16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 FGD4Q96M96 766 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 RUNDC3BQ96NL0 473 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 LRRC19Q9H756 370 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 PCMTD2Q9NV79 361 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 PARVAQ9NVD7 372 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 NUMBLQ9Y6R0 609 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 A0A087WZ62 844 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 EDNRBP24530 442 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 TCEAL1Q15170 157 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 KHDC1Q4VXA5 237 aaKnown RBP16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 TRMT10CQ7L0Y3 403 aaKnown RBP16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 ZNF677Q86XU0 584 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 CDCA5Q96FF9 252 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 FDXACB1Q9BRP7 624 aaPredicted RBP16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 NIF3L1Q9GZT8 377 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 AVENQ9NQS1 362 aaPredicted RBP16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 NMRK1Q9NWW6 199 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 NAALADL1Q9UQQ1 740 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 PPP2R3BQ9Y5P8 575 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 ARID2Q68CP9 1835 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 ACADSP16219 412 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 EFNA5P52803 228 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 AGGF1Q8N302 714 aaeCLIP16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 IFT43Q96FT9 208 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 DNPEPQ9ULA0 475 aa16.32■□□□□ 0.2
SHROOM1-201ENST00000319854 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 SIGLEC16A6NMB1 481 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 SPAG7O75391 227 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 ITGB3P05106 788 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 LAMB3Q13751 1172 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 CYP1B1Q16678 543 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 NRG4Q8WWG1 115 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 TMEM134Q9H6X4 195 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 METTL5Q9NRN9 209 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 PIGRP01833 764 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 TNNC2P02585 160 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 INSRRP14616 1297 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 NFX1Q12986 1120 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 P3H1Q32P28 736 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 WDR49Q8IV35 697 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 ANKRD13AQ8IZ07 590 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 SNF8Q96H20 258 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 ZNF333Q96JL9 665 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 LRRC37BQ96QE4 947 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 SMYD3Q9H7B4 428 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 LCTP09848 1927 aa16.31■□□□□ 0.2
SHROOM1-201ENST00000319854 E7ENQ6 273 aa16.3■□□□□ 0.2
SHROOM1-201ENST00000319854 GPR25O00155 361 aa16.3■□□□□ 0.2
SHROOM1-201ENST00000319854 FAM189A1O60320 539 aa16.3■□□□□ 0.2
SHROOM1-201ENST00000319854 GRAP2O75791 330 aa16.3■□□□□ 0.2
SHROOM1-201ENST00000319854 TTC4O95801 387 aa16.3■□□□□ 0.2
SHROOM1-201ENST00000319854 HOXC6P09630 235 aa16.3■□□□□ 0.2
SHROOM1-201ENST00000319854 TGFB3P10600 412 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms