RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CYP2S1Q96SQ9 504 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 CBWD1Q9BRT8 395 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 FGFBP2Q9BYJ0 223 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 ZSCAN16Q9H4T2 348 aaPredicted RBP15.25■□□□□ 0.03
RPP40-201ENST00000319533 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 DUS2Q9NX74 493 aaKnown RBP15.25■□□□□ 0.03
RPP40-201ENST00000319533 TBC1D7Q9P0N9 293 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 EBF1Q9UH73 591 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 MTMR6Q9Y217 621 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 SNX9Q9Y5X1 595 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 ATG2BQ96BY7 2078 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 ANAPC1Q9H1A4 1944 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 KIAA0391O15091 583 aaKnown RBP15.24■□□□□ 0.03
RPP40-201ENST00000319533 CCDC192P0DO97 292 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 PFKLP17858 780 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 TXLNAP40222 546 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 CCDC142Q17RM4 750 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 AASDHQ4L235 1098 aaPredicted RBP15.24■□□□□ 0.03
RPP40-201ENST00000319533 IL31Q6EBC2 164 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 CCDC73Q6ZRK6 1079 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 SPATA2LQ8IUW3 424 aaPredicted RBP15.24■□□□□ 0.03
RPP40-201ENST00000319533 C12orf50Q8NA57 414 aaPredicted RBP15.24■□□□□ 0.03
RPP40-201ENST00000319533 CD101Q93033 1021 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 ATP2A3Q93084 1043 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 FAM84AQ96KN4 292 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 MTMR12Q9C0I1 747 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 DUSP15Q9H1R2 295 aaPredicted RBP15.24■□□□□ 0.03
RPP40-201ENST00000319533 VPS45Q9NRW7 570 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 RXFP3Q9NSD7 469 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 INTS13Q9NVM9 706 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 POLR3BQ9NW08 1133 aaPredicted RBP15.24■□□□□ 0.03
RPP40-201ENST00000319533 ARHGAP26Q9UNA1 814 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 ZFHX4Q86UP3 3567 aa15.24■□□□□ 0.03
RPP40-201ENST00000319533 USP24Q9UPU5 2620 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 KIAA1549LQ6ZVL6 1849 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 A0A087X0B3 334 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 GOLGA8IPA6NC78 632 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 GOLGA8JA6NMD2 632 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 HCRTO43612 131 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 CKMP06732 381 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 PDIA4P13667 645 aaKnown RBP15.23■□□□□ 0.03
RPP40-201ENST00000319533 IFNAR2P48551 515 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 VSTM1Q6UX27 236 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 C4orf50Q6ZRC1 276 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 SYCP3Q8IZU3 236 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 GPD1LQ8N335 351 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 KIAA1958Q8N8K9 716 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 ARL14EPQ8N8R7 260 aaPredicted RBP15.23■□□□□ 0.03
RPP40-201ENST00000319533 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 RPLP0P6Q8NHW5 317 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 KBTBD7Q8WVZ9 684 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 ACDQ96AP0 544 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 HHIPQ96QV1 700 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 PANK4Q9NVE7 773 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 CDH9Q9ULB4 789 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 WNT6Q9Y6F9 365 aa15.23■□□□□ 0.03
RPP40-201ENST00000319533 PTPRJQ12913 1337 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 C2orf78A6NCI8 922 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 ATP2C2O75185 946 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 PRPF6O94906 941 aaKnown RBP15.22■□□□□ 0.03
RPP40-201ENST00000319533 APBB3O95704 486 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 KRT19P08727 400 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 TMEM191BP0C7N4 346 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 IDEP14735 1019 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 WARSP23381 471 aaKnown RBP15.22■□□□□ 0.03
RPP40-201ENST00000319533 PMLP29590 882 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 MPLP40238 635 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 SHC2P98077 582 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 MYO1EQ12965 1108 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 NR1H3Q13133 447 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 DMC1Q14565 340 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 SLC39A14Q15043 492 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 CCDC6Q16204 474 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 STPG1Q5TH74 334 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 SCN4BQ8IWT1 228 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 OR5B17Q8NGF7 314 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 CCDC26Q8TAB7 109 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 SH3RF2Q8TEC5 729 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 HPDLQ96IR7 371 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 ANKRD36BP1Q96IX9 119 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 TTLL2Q9BWV7 592 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 PCIF1Q9H4Z3 704 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 TRPC7Q9HCX4 862 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 CRTAC1Q9NQ79 661 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 MAGEC2Q9UBF1 373 aaPredicted RBP15.22■□□□□ 0.03
RPP40-201ENST00000319533 MYO16Q9Y6X6 1858 aa15.22■□□□□ 0.03
RPP40-201ENST00000319533 ZNF233A6NK53 670 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 RHOBTB1O94844 696 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 FAM163BP0C2L3 166 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 HDCP19113 662 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 LMO2P25791 158 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 STAT6P42226 847 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 PDE6CP51160 858 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 ZXDBP98169 803 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 CEBPZQ03701 1054 aaKnown RBP15.21■□□□□ 0.03
RPP40-201ENST00000319533 SURF1Q15526 300 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 MAPRE1Q15691 268 aaKnown RBP15.21■□□□□ 0.03
RPP40-201ENST00000319533 ST3GAL2Q16842 350 aa15.21■□□□□ 0.03
RPP40-201ENST00000319533 DUOXA2Q1HG44 320 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms