RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 CCHCR1Q8TD31 782 aa29.98■■■□□ 2.39
TUBB6-201ENST00000317702 TJP2Q9UDY2 1190 aa29.98■■■□□ 2.39
TUBB6-201ENST00000317702 CITO14578 2027 aa29.98■■■□□ 2.39
TUBB6-201ENST00000317702 hCG_1818297A0A087WSY0 165 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 PCBP1Q15365 356 aaKnown RBP eCLIP29.97■■■□□ 2.39
TUBB6-201ENST00000317702 QPCTQ16769 361 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 TFDP3Q5H9I0 405 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 PWWP2AQ96N64 755 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 KATNAL1Q9BW62 490 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 NXF3Q9H4D5 531 aaKnown RBP29.97■■■□□ 2.39
TUBB6-201ENST00000317702 NINJ2Q9NZG7 142 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 DERAQ9Y315 318 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 C17orf102A2RUQ5 167 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 GOLGA8SH3BPF8 625 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 AKR1A1P14550 325 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 HIBCHQ6NVY1 386 aaPredicted RBP29.97■■■□□ 2.39
TUBB6-201ENST00000317702 PRUNE1Q86TP1 453 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 IPO4Q8TEX9 1081 aaKnown RBP29.97■■■□□ 2.39
TUBB6-201ENST00000317702 ATXN2LQ8WWM7 1075 aaKnown RBP29.97■■■□□ 2.39
TUBB6-201ENST00000317702 CHMP6Q96FZ7 201 aa29.97■■■□□ 2.39
TUBB6-201ENST00000317702 DDX20Q9UHI6 824 aaKnown RBP29.97■■■□□ 2.39
TUBB6-201ENST00000317702 RALGAPA2Q2PPJ7 1873 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 LRRD1A4D1F6 860 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 SIGLEC16A6NMB1 481 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 PPEF2O14830 753 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 KRT3P12035 628 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 P3H1Q32P28 736 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 POLNQ7Z5Q5 900 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 ACSF2Q96CM8 615 aaPredicted RBP29.96■■■□□ 2.39
TUBB6-201ENST00000317702 TUBGCP4Q9UGJ1 667 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 ZNF148Q9UQR1 794 aa29.96■■■□□ 2.39
TUBB6-201ENST00000317702 PSMA2P25787 234 aa29.95■■■□□ 2.39
TUBB6-201ENST00000317702 HOXC8P31273 242 aa29.95■■■□□ 2.39
TUBB6-201ENST00000317702 RFC1P35251 1148 aaPredicted RBP29.95■■■□□ 2.39
TUBB6-201ENST00000317702 CDKN2BP42772 138 aa29.95■■■□□ 2.39
TUBB6-201ENST00000317702 INCA1Q0VD86 236 aa29.95■■■□□ 2.39
TUBB6-201ENST00000317702 RELL1Q8IUW5 271 aa29.95■■■□□ 2.39
TUBB6-201ENST00000317702 OTUD6BQ8N6M0 293 aa29.95■■■□□ 2.39
TUBB6-201ENST00000317702 ARHGAP39Q9C0H5 1083 aa29.95■■■□□ 2.39
TUBB6-201ENST00000317702 MICAL2O94851 1124 aa29.95■■■□□ 2.38
TUBB6-201ENST00000317702 NDST1P52848 882 aa29.95■■■□□ 2.38
TUBB6-201ENST00000317702 ZBTB6Q15916 424 aa29.95■■■□□ 2.38
TUBB6-201ENST00000317702 FOXP3Q9BZS1 431 aa29.95■■■□□ 2.38
TUBB6-201ENST00000317702 RNF19AQ9NV58 838 aa29.95■■■□□ 2.38
TUBB6-201ENST00000317702 INTS9Q9NV88 658 aaKnown RBP29.95■■■□□ 2.38
TUBB6-201ENST00000317702 BARX2Q9UMQ3 279 aaPredicted RBP29.95■■■□□ 2.38
TUBB6-201ENST00000317702 PIN4Q9Y237 131 aaKnown RBP29.95■■■□□ 2.38
TUBB6-201ENST00000317702 DRD4P21917 467 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 YARSP54577 528 aaKnown RBP29.94■■■□□ 2.38
TUBB6-201ENST00000317702 PSMC1P62191 440 aaKnown RBP29.94■■■□□ 2.38
TUBB6-201ENST00000317702 CCDC38Q502W7 563 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 GLRA4Q5JXX5 417 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 C6orf89Q6UWU4 347 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 ALKAL1Q6UXT8 129 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 CPLX4Q7Z7G2 160 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 EXOC3L1Q86VI1 746 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 ALLCQ8N6M5 410 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 C18orf25Q96B23 403 aaPredicted RBP29.94■■■□□ 2.38
TUBB6-201ENST00000317702 APOL6Q9BWW8 343 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.94■■■□□ 2.38
TUBB6-201ENST00000317702 DRG1Q9Y295 367 aaKnown RBP29.94■■■□□ 2.38
TUBB6-201ENST00000317702 TCEA3O75764 348 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 RECQL4O94761 1208 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 AXLP30530 894 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 ZCCHC9Q8N567 271 aaKnown RBP29.94■■■□□ 2.38
TUBB6-201ENST00000317702 JOSD2Q8TAC2 188 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 FNIP1Q8TF40 1166 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 CPXM1Q96SM3 734 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 WDR35Q9P2L0 1181 aa29.94■■■□□ 2.38
TUBB6-201ENST00000317702 CA12O43570 354 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 AKAP5P24588 427 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 ATP5DP30049 168 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 TM4SF4P48230 202 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 LIG3P49916 1009 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 GSCP56915 257 aaPredicted RBP29.93■■■□□ 2.38
TUBB6-201ENST00000317702 CEP128Q6ZU80 1094 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 C7orf31Q8N865 590 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 GLIS1Q8NBF1 620 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 HEXIM2Q96MH2 286 aaKnown RBP29.93■■■□□ 2.38
TUBB6-201ENST00000317702 TRIM6Q9C030 488 aaPredicted RBP29.93■■■□□ 2.38
TUBB6-201ENST00000317702 CNTN3Q9P232 1028 aa29.93■■■□□ 2.38
TUBB6-201ENST00000317702 TRIP12Q14669 1992 aaPredicted RBP29.93■■■□□ 2.38
TUBB6-201ENST00000317702 DUSP11O75319 330 aaKnown RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 C6orf222P0C671 652 aaPredicted RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 VDRP11473 427 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 VCPP55072 806 aaKnown RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 SLC25A11Q02978 314 aaKnown RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 IFT88Q13099 833 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 UBXN11Q5T124 520 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 SEC16BQ96JE7 1060 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 ZNF317Q96PQ6 595 aaPredicted RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 SYNCQ9H7C4 482 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 GABRQQ9UN88 632 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 DNALI1O14645 258 aaPredicted RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 CRYBB1P53674 252 aaPredicted RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 MYO1EQ12965 1108 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 GKAP1Q5VSY0 366 aaPredicted RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 XYLT1Q86Y38 959 aa29.92■■■□□ 2.38
TUBB6-201ENST00000317702 ARHGEF2Q92974 986 aaKnown RBP29.92■■■□□ 2.38
TUBB6-201ENST00000317702 NKD2Q969F2 451 aaPredicted RBP29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms