RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 BMP8BP34820 402 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 ARHGAP25P42331 645 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 SLC39A12Q504Y0 691 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 RSPO2Q6UXX9 243 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-201ENST00000315491 C4orf50Q6ZRC1 276 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 MCOLN2Q8IZK6 566 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 C17orf80Q9BSJ5 609 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 DUSP16Q9BY84 665 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 TSGA10Q9BZW7 698 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 CYTH4Q9UIA0 394 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 GOLGA6L9A6NEM1 432 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 C2CD2LO14523 706 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 FAM200BP0CF97 657 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 NPR3P17342 541 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 MMP8P22894 467 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 CDR1P51861 262 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 NFE2Q16621 373 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-201ENST00000315491 ARHGAP29Q52LW3 1261 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 MMS22LQ6ZRQ5 1243 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 MON1BQ7L1V2 547 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 ERICH1Q86X53 443 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 SPATA2LQ8IUW3 424 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-201ENST00000315491 CTNNBL1Q8WYA6 563 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-201ENST00000315491 TRIM11Q96F44 468 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 C11orf70Q9BRQ4 267 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 THAP2Q9H0W7 228 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 LZTFL1Q9NQ48 299 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 KRT82Q9NSB4 513 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 ADAM22Q9P0K1 906 aa17.05■□□□□ 0.32
TUBB3-201ENST00000315491 YBX2Q9Y2T7 364 aaKnown RBP17.05■□□□□ 0.32
TUBB3-201ENST00000315491 CPB1P15086 417 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 ARPP19P56211 112 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 SLC8A3P57103 927 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
TUBB3-201ENST00000315491 PTP4A2Q12974 167 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 PDCLQ13371 301 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 PTPN20Q4JDL3 420 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 MSANTD4Q8NCY6 345 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 FBXO22Q8NEZ5 403 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 SLC35F5Q8WV83 523 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 ZNF653Q96CK0 615 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 SMARCD1Q96GM5 515 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 VCPIP1Q96JH7 1222 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 TRIM10Q9UDY6 481 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 LZTS1Q9Y250 596 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
TUBB3-201ENST00000315491 C5orf67F2Z3F1 127 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 TULP2O00295 520 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 XPO1O14980 1071 aaKnown RBP17.03■□□□□ 0.32
TUBB3-201ENST00000315491 KRT86O43790 486 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 AP1G2O75843 785 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 ABL1P00519 1130 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 CALB1P05937 261 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 RB1P06400 928 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 MYBL1P10243 752 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 CTSAP10619 480 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 BDNFP23560 247 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 PBX2P40425 430 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 GPC5P78333 572 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 SMARCB1Q12824 385 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 GPR17Q13304 367 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 SLC8B1Q6J4K2 584 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 CLEC20AQ6ZU45 233 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 SPRED2Q7Z698 418 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 GPR65Q8IYL9 337 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 ARHGEF26Q96DR7 871 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 C16orf45Q96MC5 204 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-201ENST00000315491 SAMD11Q96NU1 681 aa17.03■□□□□ 0.32
TUBB3-201ENST00000315491 MRPL17Q9NRX2 175 aaKnown RBP17.03■□□□□ 0.32
TUBB3-201ENST00000315491 CAPN15O75808 1086 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 BEST1O76090 585 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 RPL17P18621 184 aaKnown RBP17.02■□□□□ 0.32
TUBB3-201ENST00000315491 DNAJB2P25686 324 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 PLA2G4AP47712 749 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 RGS7P49802 495 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 MAP3K7CLP57077 242 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 RAB30Q15771 203 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 C2CD6Q53TS8 623 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 LIN9Q5TKA1 542 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 PMF1Q6P1K2 205 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 FUBP3Q96I24 572 aaKnown RBP eCLIP17.02■□□□□ 0.321e-6■■□□□ 14.4
TUBB3-201ENST00000315491 TGS1Q96RS0 853 aaKnown RBP17.02■□□□□ 0.32
TUBB3-201ENST00000315491 CPXM1Q96SM3 734 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 SMOQ99835 787 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 CLSTN3Q9BQT9 956 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 SLC4A5Q9BY07 1137 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 PBX4Q9BYU1 374 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 RHOBTB2Q9BYZ6 727 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 TSPYL1Q9H0U9 437 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 ALG13Q9NP73 1137 aaKnown RBP17.02■□□□□ 0.32
TUBB3-201ENST00000315491 ST7Q9NRC1 585 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 ABI2Q9NYB9 513 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-201ENST00000315491 CNOT8Q9UFF9 292 aaKnown RBP17.02■□□□□ 0.32
TUBB3-201ENST00000315491 MTUS1Q9ULD2 1270 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 SSX2IPQ9Y2D8 614 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 PCDHB5Q9Y5E4 795 aa17.02■□□□□ 0.32
TUBB3-201ENST00000315491 DUSP10Q9Y6W6 482 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms