RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 CNTN3Q9P232 1028 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 SNX9Q9Y5X1 595 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 SMIM23A6NLE4 172 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 HAS3O00219 553 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 ACSL3O95573 720 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 ITGAVP06756 1048 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 PSMC4P43686 418 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 CPT1AP50416 773 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 P3H1Q32P28 736 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 ALKAL1Q6UXT8 129 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 EPS8L3Q8TE67 593 aaKnown RBP20.04■□□□□ 0.8
CD55-201ENST00000314754 DNAJC17Q9NVM6 304 aaKnown RBP20.04■□□□□ 0.8
CD55-201ENST00000314754 TUBGCP4Q9UGJ1 667 aa20.04■□□□□ 0.8
CD55-201ENST00000314754 PSEN2P49810 448 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 ZNF143P52747 638 aaPredicted RBP20.03■□□□□ 0.8
CD55-201ENST00000314754 TNFAIP8L3Q5GJ75 292 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 KCNT1Q5JUK3 1230 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 CEP128Q6ZU80 1094 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 GLIS1Q8NBF1 620 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 FRMD8P1Q9BZ68 369 aaPredicted RBP20.03■□□□□ 0.8
CD55-201ENST00000314754 NXF3Q9H4D5 531 aaKnown RBP20.03■□□□□ 0.8
CD55-201ENST00000314754 ASNSD1Q9NWL6 643 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 PIK3R2O00459 728 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 EBAG9O00559 213 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 RECQL4O94761 1208 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 PFKMP08237 780 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 KDELR1P24390 212 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 MIPP30301 263 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 PCK1P35558 622 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
CD55-201ENST00000314754 BBS12Q6ZW61 710 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 C12orf29Q8N999 325 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 TTC13Q8NBP0 860 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 SLC35B2Q8TB61 432 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 DNAJB3Q8WWF6 145 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 USP6NLQ92738 828 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 MRPL45Q9BRJ2 306 aaKnown RBP20.03■□□□□ 0.8
CD55-201ENST00000314754 GJD2Q9UKL4 321 aa20.03■□□□□ 0.8
CD55-201ENST00000314754 E5RJQ4 531 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 ARSEP51690 589 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 AUHQ13825 339 aaKnown RBP20.02■□□□□ 0.8
CD55-201ENST00000314754 SNX17Q15036 470 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 GOLGA7BQ2TAP0 167 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 GLRA4Q5JXX5 417 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 ZCCHC9Q8N567 271 aaKnown RBP20.02■□□□□ 0.8
CD55-201ENST00000314754 CMASQ8NFW8 434 aaPredicted RBP20.02■□□□□ 0.8
CD55-201ENST00000314754 C18orf25Q96B23 403 aaPredicted RBP20.02■□□□□ 0.8
CD55-201ENST00000314754 HAUS1Q96CS2 278 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 CNPY3Q9BT09 278 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 ADAM7Q9H2U9 754 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 USP18Q9UMW8 372 aa20.02■□□□□ 0.8
CD55-201ENST00000314754 TRPM7Q96QT4 1865 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 MANSC4A6NHS7 340 aaPredicted RBP20.02■□□□□ 0.79
CD55-201ENST00000314754 DNALI1O14645 258 aaPredicted RBP20.02■□□□□ 0.79
CD55-201ENST00000314754 MMP13P45452 471 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 SLCO1A2P46721 670 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 ZNF200P98182 395 aaPredicted RBP20.02■□□□□ 0.79
CD55-201ENST00000314754 PKDCCQ504Y2 493 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 SRLQ86TD4 932 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 TMEM40Q8WWA1 233 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 SERPINB12Q96P63 405 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 PCDH9Q9HC56 1237 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 PCSK1NQ9UHG2 260 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 UBQLN1Q9UMX0 589 aaKnown RBP20.02■□□□□ 0.79
CD55-201ENST00000314754 Q9Y3F1 56 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 NME7Q9Y5B8 376 aa20.02■□□□□ 0.79
CD55-201ENST00000314754 C2CD4BA6NLJ0 364 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 TRAPPC3O43617 180 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 CST8O60676 142 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 FAM107AO95990 144 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 GPD1P21695 349 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 SEC24CP53992 1094 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 IFI35P80217 286 aaPredicted RBP20.01■□□□□ 0.79
CD55-201ENST00000314754 PLCB3Q01970 1234 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 KYNUQ16719 465 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 PPP1R26Q5T8A7 1209 aaPredicted RBP20.01■□□□□ 0.79
CD55-201ENST00000314754 C9orf57Q5W0N0 161 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 FAM183BPQ6ZVS7 135 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 NLRP14Q86W24 1093 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 UNC93AQ86WB7 457 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 RASAL3Q86YV0 1011 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 MYCBPAPQ8TBZ2 947 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 PIWIL1Q96J94 861 aaKnown RBP20.01■□□□□ 0.79
CD55-201ENST00000314754 AP5M1Q9H0R1 490 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 NINJ2Q9NZG7 142 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 PIN4Q9Y237 131 aaKnown RBP20.01■□□□□ 0.79
CD55-201ENST00000314754 RRP15Q9Y3B9 282 aaKnown RBP20.01■□□□□ 0.79
CD55-201ENST00000314754 CEP350Q5VT06 3117 aa20.01■□□□□ 0.79
CD55-201ENST00000314754 E7EVH7 732 aa20■□□□□ 0.79
CD55-201ENST00000314754 NDC80O14777 642 aa20■□□□□ 0.79
CD55-201ENST00000314754 TREHO43280 583 aa20■□□□□ 0.79
CD55-201ENST00000314754 TRUB2O95900 331 aaKnown RBP20■□□□□ 0.79
CD55-201ENST00000314754 SETSIPP0DME0 302 aa20■□□□□ 0.79
CD55-201ENST00000314754 BEX3Q00994 111 aa20■□□□□ 0.79
CD55-201ENST00000314754 OR6B2Q6IFH4 312 aa20■□□□□ 0.79
CD55-201ENST00000314754 ACOT1Q86TX2 421 aa20■□□□□ 0.79
CD55-201ENST00000314754 KCTD6Q8NC69 237 aa20■□□□□ 0.79
CD55-201ENST00000314754 ACTL9Q8TC94 416 aa20■□□□□ 0.79
CD55-201ENST00000314754 CENPTQ96BT3 561 aa20■□□□□ 0.79
CD55-201ENST00000314754 CCT8L2Q96SF2 557 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms