RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 IFNAR2P48551 515 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 STK4Q13043 487 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 PKP1Q13835 747 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 PON2Q15165 354 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 SGSM1Q2NKQ1 1148 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 GRAMD1CQ8IYS0 662 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 CPA6Q8N4T0 437 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 CCDC150Q8NCX0 1101 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 MYLPFQ96A32 169 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 RSPRY1Q96DX4 576 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 SPATA17Q96L03 361 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 SLITRK1Q96PX8 696 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 MED10Q9BTT4 135 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 SMG9Q9H0W8 520 aaKnown RBP13.54□□□□□ -0.24
CKS2-201ENST00000314355 GMEB2Q9UKD1 530 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 ANK1P16157 1881 aa13.54□□□□□ -0.24
CKS2-201ENST00000314355 ZFHX2Q9C0A1 2572 aaPredicted RBP13.53□□□□□ -0.24
CKS2-201ENST00000314355 ARNTLO00327 626 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 ACTN4O43707 911 aaKnown RBP13.53□□□□□ -0.24
CKS2-201ENST00000314355 ATP2C2O75185 946 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 ABL1P00519 1130 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 CHRNB1P11230 501 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 KRT13P13646 458 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 ID4P47928 161 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 SOX9P48436 509 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 MYL6P60660 151 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 FZD5Q13467 585 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 ZNF699Q32M78 642 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 MDH1BQ5I0G3 518 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 TSSK4Q6SA08 328 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 SLC9A9Q8IVB4 645 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 MAML2Q8IZL2 1156 aaPredicted RBP13.53□□□□□ -0.24
CKS2-201ENST00000314355 ZBTB44Q8NCP5 570 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 KBTBD7Q8WVZ9 684 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 USP13Q92995 863 aaPredicted RBP13.53□□□□□ -0.24
CKS2-201ENST00000314355 PCED1BQ96HM7 432 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 FAM84AQ96KN4 292 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 C8orf48Q96LL4 319 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 MRPL45Q9BRJ2 306 aaKnown RBP13.53□□□□□ -0.24
CKS2-201ENST00000314355 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 DUS2Q9NX74 493 aaKnown RBP13.53□□□□□ -0.24
CKS2-201ENST00000314355 PTPRJQ12913 1337 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 WDFY4Q6ZS81 3184 aa13.53□□□□□ -0.24
CKS2-201ENST00000314355 IKBKBO14920 756 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 RTN3O95197 1032 aaPredicted RBP13.52□□□□□ -0.25
CKS2-201ENST00000314355 NR3C1P04150 777 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 CNR2P34972 360 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 FOXK2Q01167 660 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 NCOA4Q13772 614 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 MTF1Q14872 753 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 LIMS2Q7Z4I7 341 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 TMEM150AQ86TG1 271 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 KIAA2013Q8IYS2 634 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 STKLD1Q8NE28 680 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 PARD3BQ8TEW8 1205 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 TAF4BQ92750 862 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 PKMYT1Q99640 499 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 FAM83CQ9BQN1 747 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 EBF3Q9H4W6 596 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 CRTAC1Q9NQ79 661 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 PRMT8Q9NR22 394 aaPredicted RBP13.52□□□□□ -0.25
CKS2-201ENST00000314355 HOOK1Q9UJC3 728 aaKnown RBP13.52□□□□□ -0.25
CKS2-201ENST00000314355 SLC8A2Q9UPR5 921 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 CACNA1IQ9P0X4 2223 aa13.52□□□□□ -0.25
CKS2-201ENST00000314355 A0A1W2PQ27 194 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 A0A1W2PQ64 194 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 A0A1W2PQD8 194 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 KLRC4O43908 158 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 DRD1P21728 446 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 SDHBP21912 280 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 TNK2Q07912 1038 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 IFRD2Q12894 506 aaPredicted RBP13.51□□□□□ -0.25
CKS2-201ENST00000314355 FBXO43Q4G163 708 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 NUP93Q8N1F7 819 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 ARL14EPQ8N8R7 260 aaPredicted RBP13.51□□□□□ -0.25
CKS2-201ENST00000314355 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 TMC2Q8TDI7 906 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 OSCP1Q8WVF1 389 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 ZNF516Q92618 1163 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 ATP2A3Q93084 1043 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 LRRC3BQ96PB8 259 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 CYP2S1Q96SQ9 504 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 VRTNQ9H8Y1 702 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 HPSEQ9Y251 543 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 F5P12259 2224 aa13.51□□□□□ -0.25
CKS2-201ENST00000314355 LRRIQ3A6PVS8 624 aaPredicted RBP13.5□□□□□ -0.25
CKS2-201ENST00000314355 F8VP50 259 aa13.5□□□□□ -0.25
CKS2-201ENST00000314355 SLC9A3R1O14745 358 aaPredicted RBP13.5□□□□□ -0.25
CKS2-201ENST00000314355 HCRTO43612 131 aa13.5□□□□□ -0.25
CKS2-201ENST00000314355 RHOBTB3O94955 611 aa13.5□□□□□ -0.25
CKS2-201ENST00000314355 ZNF202O95125 648 aa13.5□□□□□ -0.25
CKS2-201ENST00000314355 NFATC1O95644 943 aa13.5□□□□□ -0.25
CKS2-201ENST00000314355 YWHAQP27348 245 aa13.5□□□□□ -0.25
CKS2-201ENST00000314355 PSMC2P35998 433 aaKnown RBP13.5□□□□□ -0.25
CKS2-201ENST00000314355 CASP4P49662 377 aa13.5□□□□□ -0.25
CKS2-201ENST00000314355 VAMP7P51809 220 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms