RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 MICAL2O94851 1124 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 F9P00740 461 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 HMGCRP04035 888 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 RAG1P15918 1043 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 DAW1Q8N136 415 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 FAM71DQ8N9W8 422 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 SLC2A14Q8TDB8 520 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 USP18Q9UMW8 372 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 COL1A2P08123 1366 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 SMIM35A0A1B0GVV1 85 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 DUSP11O75319 330 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 ASS1P00966 412 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 MLH1P40692 756 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 ELAVL2Q12926 359 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 ZNF280DQ6N043 979 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 STKLD1Q8NE28 680 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 ANKRD7Q92527 254 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 UNCXA6NJT0 531 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 CIB2O75838 187 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 MCL1Q07820 350 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 IFT88Q13099 833 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 KYNUQ16719 465 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 NUGGCQ68CJ6 796 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 CHSY1Q86X52 802 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 MIB1Q86YT6 1006 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 ATPAF2Q8N5M1 289 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 OR6P1Q8NGX9 317 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 SEMA4DQ92854 862 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 RCCD1A6NED2 376 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 DARSP14868 501 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 RASSF2P50749 326 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 ITGA8P53708 1063 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 DRP2Q13474 957 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 STAT4Q14765 748 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 NT5DC3Q86UY8 548 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 SCUBE3Q8IX30 993 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 LENG1Q96BZ8 264 aaPredicted RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 DDX50Q9BQ39 737 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 NTPCRQ9BSD7 190 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 MAGEB5Q9BZ81 275 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 SENP6Q9GZR1 1112 aaPredicted RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 HSD3B7Q9H2F3 369 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 AAASQ9NRG9 546 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 C3orf70A6NLC5 250 aaPredicted RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 TBKBP1A7MCY6 615 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 H7C4K7 107 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 CA12O43570 354 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 ZNF189O75820 626 aaPredicted RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 FBXO21O94952 628 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 GJB6O95452 261 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 STIP1P31948 543 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 KPNA2P52292 529 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 SPARCL1Q14515 664 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 TRMT10CQ7L0Y3 403 aaKnown RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 KDELC2Q7Z4H8 507 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 LNX1Q8TBB1 728 aaPredicted RBP14.29□□□□□ -0.12
DDX54-202ENST00000314045 STMN2Q93045 179 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 MLXIPLQ9NP71 852 aa14.29□□□□□ -0.12
DDX54-202ENST00000314045 TREHO43280 583 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 SP2Q02086 613 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 SPATS2Q86XZ4 545 aaKnown RBP14.28□□□□□ -0.12
DDX54-202ENST00000314045 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 FBXO32Q969P5 355 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 TTC17Q96AE7 1141 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 FOXP3Q9BZS1 431 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 VIPAS39Q9H9C1 493 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 LSM7Q9UK45 103 aaKnown RBP14.28□□□□□ -0.12
DDX54-202ENST00000314045 PCDHGC5Q9Y5F6 944 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 CD52P31358 61 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 GRM5P41594 1212 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 YME1L1Q96TA2 773 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 CATSPERBQ9H7T0 1116 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 XPO7Q9UIA9 1087 aaKnown RBP14.28□□□□□ -0.12
DDX54-202ENST00000314045 VGLL3A8MV65 326 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 NNMTP40261 264 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 CNGA2Q16280 664 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 CCDC38Q502W7 563 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 TAF1BQ53T94 588 aaPredicted RBP14.28□□□□□ -0.12
DDX54-202ENST00000314045 ARHGAP24Q8N264 748 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 ARHGAP18Q8N392 663 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 DCLK2Q8N568 766 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 RIN2Q8WYP3 895 aaPredicted RBP14.28□□□□□ -0.12
DDX54-202ENST00000314045 CYTH2Q99418 400 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 VPS11Q9H270 941 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 UMODL1Q5DID0 1318 aa14.28□□□□□ -0.12
DDX54-202ENST00000314045 GPC4O75487 556 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 PPP2R2AP63151 447 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 OTUD4Q01804 1114 aaKnown RBP14.27□□□□□ -0.12
DDX54-202ENST00000314045 PDK2Q15119 407 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 ACCSLQ4AC99 568 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 SPOCD1Q6ZMY3 1216 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 SLFN11Q7Z7L1 901 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 RPL10AP62906 217 aaKnown RBP14.27□□□□□ -0.12
DDX54-202ENST00000314045 FMO1Q01740 532 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 ADIGQ0VDE8 80 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 FAM171A1Q5VUB5 890 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 WSCD1Q658N2 575 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms