RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 RAP1GAPP47736 663 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 TNNC1P63316 161 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 BIRC3Q13489 604 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 TRPC3Q13507 836 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 MDH1BQ5I0G3 518 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 CEP135Q66GS9 1140 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 ZNF852Q6ZMS4 543 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 PAQR9Q6ZVX9 377 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 FRMD5Q7Z6J6 570 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 MON1AQ86VX9 555 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 MAB21L3Q8N8X9 362 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 OR6B3Q8NGW1 331 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 CHFRQ96EP1 664 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 NELL2Q99435 816 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 MAGEC2Q9UBF1 373 aaPredicted RBP21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 ZMYM5Q9UJ78 669 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 PIAS3Q9Y6X2 628 aa21.16■□□□□ 0.98
PDZRN3-202ENST00000308537 DDX6P26196 483 aaKnown RBP eCLIP21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 RPS9P46781 194 aaKnown RBP21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 SOX9P48436 509 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 PPP3CAQ08209 521 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 MAPRE1Q15691 268 aaKnown RBP21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 TAF12Q16514 161 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 ZNF699Q32M78 642 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 TXNDC11Q6PKC3 985 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 ASCL5Q7RTU5 278 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 SCN4BQ8IWT1 228 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 BPIFB1Q8TDL5 484 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 GCNAQ96QF7 691 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 FAM83CQ9BQN1 747 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 TTLL2Q9BWV7 592 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 B3GNT5Q9BYG0 378 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 ZNF518BQ9C0D4 1074 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 GTSE1Q9NYZ3 720 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 GCNT4Q9P109 453 aa21.15■□□□□ 0.98
PDZRN3-202ENST00000308537 ASPAP45381 313 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 FAM160A1Q05DH4 1040 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 ENPEPQ07075 957 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 TNK2Q07912 1038 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 ARHGAP29Q52LW3 1261 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 COBLL1Q53SF7 1204 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 ZNF667Q5HYK9 610 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 SPOPLQ6IQ16 392 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 ZC3H3Q8IXZ2 948 aaKnown RBP21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 CELF5Q8N6W0 485 aaKnown RBP21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 B3GALNT2Q8NCR0 500 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 ERCC4Q92889 916 aaPredicted RBP21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 C8orf48Q96LL4 319 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 CEP295NLQ96MC4 621 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 SNX25Q9H3E2 840 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 HPS4Q9NQG7 708 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 UXTQ9UBK9 157 aaPredicted RBP21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 HMGXB4Q9UGU5 601 aa21.14■□□□□ 0.97
PDZRN3-202ENST00000308537 PRR23AA6NEV1 266 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 OTOL1A6NHN0 477 aaPredicted RBP21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 A8MXQ7 604 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 F8VP50 259 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 CLDN5O00501 218 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 MAN2B1O00754 1011 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 PHACTR2O75167 634 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 KIF20AO95235 890 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 HLA-DRAP01903 254 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 SP9P0CG40 484 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 TRIM49P0CI25 452 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 TRIM49CP0CI26 452 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 VAMP7P51809 220 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 CYP27A1Q02318 531 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 GAS6Q14393 721 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 ZNF268Q14587 947 aaPredicted RBP21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 EDRF1Q3B7T1 1238 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 MRPS31Q92665 395 aaKnown RBP21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 CCDC47Q96A33 483 aaKnown RBP21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 BCO2Q9BYV7 579 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 APOBEC3GQ9HC16 384 aaKnown RBP21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 FRMD4BQ9Y2L6 1034 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 PCDHA5Q9Y5H7 936 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 SPTBN4Q9H254 2564 aa21.13■□□□□ 0.97
PDZRN3-202ENST00000308537 CHRNB1P11230 501 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 CCNE1P24864 410 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 PRCPP42785 496 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 MAGEA9P43362 315 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 PMS1P54277 932 aaKnown RBP21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 NOP14P78316 857 aaKnown RBP21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 ZXDBP98169 803 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 ADAM9Q13443 819 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 SCARA5Q6ZMJ2 495 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 DENND5BQ6ZUT9 1274 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 INTS8Q75QN2 995 aaKnown RBP21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 TAS1R2Q8TE23 839 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 FAM3CQ92520 227 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 NELL1Q92832 810 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 TIGD1Q96MW7 591 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 CYP2S1Q96SQ9 504 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 CHRDQ9H2X0 955 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 TDP1Q9NUW8 608 aa21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 NDRG2Q9UN36 371 aaKnown RBP21.12■□□□□ 0.97
PDZRN3-202ENST00000308537 C2orf78A6NCI8 922 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 DPYSL4O14531 572 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 GFRA3O60609 400 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 TDGF1P13385 188 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms