RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GTPBP10A4D1E9 387 aaKnown RBP15.27■□□□□ 0.04
PTPN9-201ENST00000306726 NEMP1O14524 444 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 RBP3P10745 1247 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 FAAP100Q0VG06 881 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 OR6B2Q6IFH4 312 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 GPD1LQ8N335 351 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 SLC10A4Q96EP9 437 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 HHIPL1Q96JK4 782 aa15.27■□□□□ 0.04
PTPN9-201ENST00000306726 TCRBV7S3A2A0A539 114 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 BTNL10A8MVZ5 291 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 GSTA1P08263 222 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 PAEPP09466 180 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 ATP6V1B1P15313 513 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 CALB2P22676 271 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 RBBP5Q15291 538 aaKnown RBP15.27■□□□□ 0.03
PTPN9-201ENST00000306726 WDR72Q3MJ13 1102 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 CGB2Q6NT52 195 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 DPY19L2P1Q6NXN4 242 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 STK32AQ8WU08 396 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 ABTB1Q969K4 478 aaPredicted RBP15.27■□□□□ 0.03
PTPN9-201ENST00000306726 MMP19Q99542 508 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 MRPL47Q9HD33 250 aaKnown RBP15.27■□□□□ 0.03
PTPN9-201ENST00000306726 PAPOLBQ9NRJ5 636 aaKnown RBP15.27■□□□□ 0.03
PTPN9-201ENST00000306726 WHRNQ9P202 907 aa15.27■□□□□ 0.03
PTPN9-201ENST00000306726 POLR2AP24928 1970 aaKnown RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 CDH6P55285 790 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 EIF3EP60228 445 aaKnown RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 ZNF268Q14587 947 aaPredicted RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 Q3C1V9 767 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 ZBTB46Q86UZ6 589 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 MAIP1Q8WWC4 291 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 STOML1Q9UBI4 398 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 GRID1Q9ULK0 1009 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 KCNH4Q9UQ05 1017 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 MROH7Q68CQ1 1323 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 ZBTB48P10074 688 aaPredicted RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 SKIP12755 728 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 SESTD1Q86VW0 696 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 SPATA18Q8TC71 538 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 AFG3L2Q9Y4W6 797 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 FRMPD4Q14CM0 1322 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 PHBP35232 272 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 ELK3P41970 407 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 WNT7BP56706 349 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 NCOA4Q13772 614 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 CHI3L2Q15782 390 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 PRPF39Q86UA1 669 aaKnown RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 UTP4Q969X6 686 aaKnown RBP15.26■□□□□ 0.03
PTPN9-201ENST00000306726 CENPTQ96BT3 561 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 SYT15Q9BQS2 421 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 SLC17A6Q9P2U8 582 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 PCDHB2Q9Y5E7 798 aa15.26■□□□□ 0.03
PTPN9-201ENST00000306726 MAP3K13O43283 966 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 ARL4CP56559 192 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 MYL6P60660 151 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 RABGAP1LQ5R372 815 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 WDR60Q8WVS4 1066 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 PTPRN2Q92932 1015 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 BORCS6Q96GS4 357 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 PGLYRP2Q96PD5 576 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 NMRK1Q9NWW6 199 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 SLC45A1Q9Y2W3 748 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 PROSCO94903 275 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 ITGBL1O95965 494 aaPredicted RBP15.25■□□□□ 0.03
PTPN9-201ENST00000306726 TNFSF9P41273 254 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 PDE1BQ01064 536 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 AMHR2Q16671 573 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 KBTBD12Q3ZCT8 623 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 TCHHL1Q5QJ38 904 aaPredicted RBP15.25■□□□□ 0.03
PTPN9-201ENST00000306726 IZUMO2Q6UXV1 221 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 LMO3Q8TAP4 145 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 HELQQ8TDG4 1101 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 SHC3Q92529 594 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 PGBD4Q96DM1 585 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 FGD4Q96M96 766 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 AGAP3Q96P47 875 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 PSMC3IPQ9P2W1 217 aaPredicted RBP15.25■□□□□ 0.03
PTPN9-201ENST00000306726 A0A1B0GVG6 124 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 KCNN4O15554 427 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 SNAPC2Q13487 334 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 MSS51Q4VC12 460 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 FNBP1LQ5T0N5 605 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 NUDCD3Q8IVD9 361 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 SAMD3Q8N6K7 520 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 C3orf20Q8ND61 904 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 FEZF2Q8TBJ5 459 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 NMD3Q96D46 503 aaKnown RBP15.25■□□□□ 0.03
PTPN9-201ENST00000306726 MOCOSQ96EN8 888 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 SLC5A4Q9NY91 659 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 TXNDC16Q9P2K2 825 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 OTOFQ9HC10 1997 aa15.25■□□□□ 0.03
PTPN9-201ENST00000306726 RNF8O76064 485 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 AMPD1P23109 780 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 CYP3A7P24462 503 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 GTF2A2P52657 109 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms