RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FAN1Q9Y2M0 1017 aa18.5■□□□□ 0.55
KRT28-201ENST00000306658 CCDC66A2RUB6 948 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 F8W810 466 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 GOLGA8SH3BPF8 625 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 ITGB8P26012 769 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 ACADSBP45954 432 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 RPL7AP62424 266 aaKnown RBP18.49■□□□□ 0.55
KRT28-201ENST00000306658 YWHAHQ04917 246 aaPredicted RBP18.49■□□□□ 0.55
KRT28-201ENST00000306658 KIAA0319Q5VV43 1072 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 ZDHHC17Q8IUH5 632 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 TRIM7Q9C029 511 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 TJP2Q9UDY2 1190 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 ADAM28Q9UKQ2 775 aa18.49■□□□□ 0.55
KRT28-201ENST00000306658 E5RJQ4 531 aa18.48■□□□□ 0.55
KRT28-201ENST00000306658 DDX3YO15523 660 aaKnown RBP18.48■□□□□ 0.55
KRT28-201ENST00000306658 AMHP03971 560 aa18.48■□□□□ 0.55
KRT28-201ENST00000306658 EN2P19622 333 aaPredicted RBP18.48■□□□□ 0.55
KRT28-201ENST00000306658 MAN1A1P33908 653 aa18.48■□□□□ 0.55
KRT28-201ENST00000306658 RGS7P49802 495 aa18.48■□□□□ 0.55
KRT28-201ENST00000306658 TSPY1Q01534 308 aa18.48■□□□□ 0.55
KRT28-201ENST00000306658 MAPRE1Q15691 268 aaKnown RBP18.48■□□□□ 0.55
KRT28-201ENST00000306658 OR6B2Q6IFH4 312 aa18.48■□□□□ 0.55
KRT28-201ENST00000306658 HSFY1Q96LI6 401 aa18.48■□□□□ 0.55
KRT28-201ENST00000306658 MYBPHLA2RUH7 354 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 TULP2O00295 520 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 XPO1O14980 1071 aaKnown RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 SYN3O14994 580 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 DGKIO75912 1065 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 GJB6O95452 261 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 NPR3P17342 541 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 CTNNA2P26232 953 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 TKTP29401 623 aaKnown RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 CTNNA1P35221 906 aaKnown RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 PLA2G4AP47712 749 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 PIGHQ14442 188 aaPredicted RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 INTS6LQ5JSJ4 861 aaKnown RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 UBXN4Q92575 508 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 CD101Q93033 1021 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 TOP1MTQ969P6 601 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 PCED1BQ96HM7 432 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 RTP3Q9BQQ7 232 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 B3GNT5Q9BYG0 378 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 CARD9Q9H257 536 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 PRKAG2Q9UGJ0 569 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.47■□□□□ 0.55
KRT28-201ENST00000306658 PCDHA3Q9Y5H8 950 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 FNDC1Q4ZHG4 1894 aaPredicted RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 CLDN5O00501 218 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 TADA3O75528 432 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 FAM200BP0CF97 657 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 RFC1P35251 1148 aaPredicted RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 RPL34P49207 117 aaKnown RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 SLC11A1P49279 550 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 ELAVL2Q12926 359 aaKnown RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 FAM102AQ5T9C2 384 aaPredicted RBP18.47■□□□□ 0.55
KRT28-201ENST00000306658 FAM171BQ6P995 826 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 PAQR9Q6ZVX9 377 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 LRRN4CLQ8ND94 238 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 FNIP1Q8TF40 1166 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 GOLGA1Q92805 767 aa18.47■□□□□ 0.55
KRT28-201ENST00000306658 CEP104O60308 925 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 BAIAP3O94812 1187 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 OAZ2O95190 189 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 GALTP07902 379 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 ALDH7A1P49419 539 aaKnown RBP18.46■□□□□ 0.55
KRT28-201ENST00000306658 FAM183BPQ6ZVS7 135 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 ZNF572Q7Z3I7 529 aaPredicted RBP18.46■□□□□ 0.55
KRT28-201ENST00000306658 FAM35AQ86V20 835 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 ACTRT1Q8TDG2 376 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 METTL5Q9NRN9 209 aaKnown RBP18.46■□□□□ 0.55
KRT28-201ENST00000306658 KRT82Q9NSB4 513 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 TSC2P49815 1807 aa18.46■□□□□ 0.55
KRT28-201ENST00000306658 SF3B1O75533 1304 aaKnown RBP eCLIP18.46■□□□□ 0.55
KRT28-201ENST00000306658 PDE2AO00408 941 aaPredicted RBP18.45■□□□□ 0.54
KRT28-201ENST00000306658 PIK3R2O00459 728 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 PEX5P50542 639 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 RWDD2BP57060 319 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 SLC6A3Q01959 620 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 ITIH3Q06033 890 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 CLUL1Q15846 466 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 CCDC142Q17RM4 750 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 CLEC20AQ6ZU45 233 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 PIGZQ86VD9 579 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 SCUBE3Q8IX30 993 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 NIPA2Q8N8Q9 360 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 SMARCD1Q96GM5 515 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 MS4A14Q96JA4 679 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 IL23AQ9NPF7 189 aa18.45■□□□□ 0.54
KRT28-201ENST00000306658 AP1G2O75843 785 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 SCNN1AP37088 669 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 BCAR1P56945 870 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 FAM171A1Q5VUB5 890 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 OLFML1Q6UWY5 402 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 RHOT1Q8IXI2 618 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 RASGEF1CQ8N431 466 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 OR10T2Q8NGX3 314 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 JOSD2Q8TAC2 188 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 KCTD13Q8WZ19 329 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms