RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 GGA3Q9NZ52 723 aa15.88■□□□□ 0.13
CSDC2-201ENST00000306149 PGK2P07205 417 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 CXCL8P10145 99 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 TARSP26639 723 aaKnown RBP15.87■□□□□ 0.13
CSDC2-201ENST00000306149 PSEN1P49768 467 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 BBS9Q3SYG4 887 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 HHATQ5VTY9 493 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 LVRNQ6Q4G3 990 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 VSIG1Q86XK7 387 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 RAB3IPQ96QF0 476 aaPredicted RBP15.87■□□□□ 0.13
CSDC2-201ENST00000306149 RABGEF1Q9UJ41 708 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 CHKBQ9Y259 395 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 KDELR1P24390 212 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 EFNA5P52803 228 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
CSDC2-201ENST00000306149 SH3PXD2AQ5TCZ1 1133 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 FAM160B1Q5W0V3 765 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 LRRC8CQ8TDW0 803 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 RSAD2Q8WXG1 361 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 CALN1Q9BXU9 219 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 SDCBP2Q9H190 292 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 SENP1Q9P0U3 644 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 HAO1Q9UJM8 370 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 SUFUQ9UMX1 484 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 SHOC2Q9UQ13 582 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 FARP1Q9Y4F1 1045 aaPredicted RBP15.87■□□□□ 0.13
CSDC2-201ENST00000306149 TMEM63AO94886 807 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 MMRN1Q13201 1228 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 NPNTQ6UXI9 565 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 FBXO36Q8NEA4 188 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 MINDY3Q9H8M7 445 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 PSMC3IPQ9P2W1 217 aaPredicted RBP15.87■□□□□ 0.13
CSDC2-201ENST00000306149 PCDHGC3Q9UN70 934 aa15.87■□□□□ 0.13
CSDC2-201ENST00000306149 SMG5Q9UPR3 1016 aaKnown RBP15.87■□□□□ 0.13
CSDC2-201ENST00000306149 TYROBPO43914 113 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ATP5HO75947 161 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ERBB2P04626 1255 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ADRA1DP25100 572 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 AP3M2P53677 418 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 BASP1P80723 227 aaKnown RBP15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ATP11AP98196 1134 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 MOGSQ13724 837 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 RFX6Q8HWS3 928 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ZBTB8OSQ8IWT0 167 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 KCTD6Q8NC69 237 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 CHST13Q8NET6 341 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ZNF518BQ9C0D4 1074 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 SMYD3Q9H7B4 428 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 PPCSQ9HAB8 311 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 MGAMO43451 1857 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 SIGLEC16A6NMB1 481 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ZBTB42B2RXF5 422 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 TNNC2P02585 160 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 CDH5P33151 784 aaPredicted RBP15.86■□□□□ 0.13
CSDC2-201ENST00000306149 CLCN3P51790 818 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 GEMIN4P57678 1058 aaKnown RBP15.86■□□□□ 0.13
CSDC2-201ENST00000306149 RNASELQ05823 741 aaKnown RBP15.86■□□□□ 0.13
CSDC2-201ENST00000306149 PDK4Q16654 411 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 PARP6Q2NL67 630 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 IER5Q5VY09 327 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ZNF449Q6P9G9 518 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 ZC3H18Q86VM9 953 aaKnown RBP15.86■□□□□ 0.13
CSDC2-201ENST00000306149 NIPA2Q8N8Q9 360 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 LRRN4Q8WUT4 740 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 COPS5Q92905 334 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 KCNN1Q92952 543 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 UTP4Q969X6 686 aaKnown RBP15.86■□□□□ 0.13
CSDC2-201ENST00000306149 LRMDAQ9H2I8 198 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 SNCAIPQ9Y6H5 919 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 USH1CQ9Y6N9 552 aa15.86■□□□□ 0.13
CSDC2-201ENST00000306149 MYCNP04198 464 aaPredicted RBP15.85■□□□□ 0.13
CSDC2-201ENST00000306149 NFICP08651 508 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 IQCF3P0C7M6 154 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 RAD23BP54727 409 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 YWHAEP62258 255 aaKnown RBP15.85■□□□□ 0.13
CSDC2-201ENST00000306149 OVGP1Q12889 678 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 SETDB1Q15047 1291 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 RASA2Q15283 850 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 ATF7IP2Q5U623 682 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 IGDCC3Q8IVU1 814 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 PPIL6Q8IXY8 311 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 NAT8LQ8N9F0 302 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 UBA3Q8TBC4 463 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 LRRC37BQ96QE4 947 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 PAFAH2Q99487 392 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 BATF3Q9NR55 127 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 XPO7Q9UIA9 1087 aaKnown RBP15.85■□□□□ 0.13
CSDC2-201ENST00000306149 SIX4Q9UIU6 781 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 CHMP2BQ9UQN3 213 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 NDC80O14777 642 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 EDF1O60869 148 aaKnown RBP15.85■□□□□ 0.13
CSDC2-201ENST00000306149 MIPP30301 263 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 PTPN7P35236 360 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 CCNG1P51959 295 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 TAP1Q03518 808 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 EFHC2Q5JST6 749 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 METTL7BQ6UX53 244 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 LBX2Q6XYB7 198 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 OTOAQ7RTW8 1153 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 XYLT1Q86Y38 959 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms