RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CAND2O75155 1236 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 EOMESO95936 686 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 PAEPP09466 180 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 C2orf54Q08AI8 447 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 GDF6Q6KF10 455 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-202ENST00000306042 CNKSR3Q6P9H4 555 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 CEP120Q8N960 986 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 DEPDC1BQ8WUY9 529 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 DNAJC19Q96DA6 116 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 CFAP57Q96MR6 1250 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 ANO9A1A5B4 782 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 PRR23AA6NEV1 266 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 SLC9A3R1O14745 358 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-202ENST00000306042 TMEM253P0C7T8 217 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 BRCC3P46736 316 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 RPS6KA2Q15349 733 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 SMTNL2Q2TAL5 461 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 SDCCAG8Q86SQ7 713 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-202ENST00000306042 SLC35C1Q96A29 364 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 DCUN1D1Q96GG9 259 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 PLCD4Q9BRC7 762 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 SAGE1Q9NXZ1 904 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 RSPH14Q9UHP6 348 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 TTC7AQ9ULT0 858 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-202ENST00000306042 INSL6Q9Y581 213 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 C22orf31O95567 290 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 CCR1P32246 355 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 TBX4P57082 545 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 MTA1Q13330 715 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 GTF2H3Q13889 308 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 IL17AQ16552 155 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 HYIQ5T013 277 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 SGIP1Q9BQI5 828 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 CINPQ9BW66 212 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-202ENST00000306042 DCLK3Q9C098 648 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 PACSIN2Q9UNF0 486 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-202ENST00000306042 MYH2Q9UKX2 1941 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 UBR2Q8IWV8 1755 aa9.68□□□□□ -0.86
PTPRE-202ENST00000306042 TRAV19A0A0A6YYK7 116 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 TSPAN1O60635 241 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 RHOCP08134 193 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 PFKMP08237 780 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ACADMP11310 421 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 GJA5P36382 358 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SETDB1Q15047 1291 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ERCC6LQ2NKX8 1250 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ATAT1Q5SQI0 421 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 CEP85LQ5SZL2 805 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ANKRD42Q8N9B4 389 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 PDZD8Q8NEN9 1154 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ZNF606Q8WXB4 792 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ZFP42Q96MM3 310 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SERPINB11Q96P15 392 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SYNDIG1Q9H7V2 258 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 RRN3Q9NYV6 651 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 VPS18Q9P253 973 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SMIM28A0A1B0GU29 152 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 KCNN4O15554 427 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 CCDC130P13994 396 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ARL2P36404 184 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SLFN11Q7Z7L1 901 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 KRT222Q8N1A0 295 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ALKBH8Q96BT7 664 aaKnown RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 G3BP2Q9UN86 482 aaKnown RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 RASSF10A6NK89 507 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 E5RI56 91 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 NCK2O43639 380 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 FGFR1P11362 822 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 RFC2P35250 354 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 PMS1P54277 932 aaKnown RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 YWHAZP63104 245 aaKnown RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 C2CD6Q53TS8 623 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 FAM131BQ86XD5 332 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 FAM172AQ8WUF8 416 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 AGAP3Q96P47 875 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 CACYBPQ9HB71 228 aaKnown RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 TMEM161AQ9NX61 479 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ATP8A1Q9Y2Q0 1164 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 DERAQ9Y315 318 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 F8VZ95 297 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 MAPK13O15264 365 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ATP2C2O75185 946 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 HDCP19113 662 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ATP5C1P36542 298 aaKnown RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 OXCT1P55809 520 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SLMAPQ14BN4 828 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ECM1Q16610 540 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SLC47A2Q86VL8 602 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 ELMO3Q96BJ8 720 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 HDAC11Q96DB2 347 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SMYD3Q9H7B4 428 aa9.67□□□□□ -0.86
PTPRE-202ENST00000306042 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
PTPRE-202ENST00000306042 MTSS1O43312 755 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 GPS1Q13098 491 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 FBF1Q8TES7 1133 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 SMG7Q92540 1137 aaKnown RBP9.66□□□□□ -0.86
PTPRE-202ENST00000306042 MS4A4AQ96JQ5 239 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms