RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 LRRD1A4D1F6 860 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 PTGESO14684 152 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 LIASO43766 372 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 SHOX2O60902 331 aaPredicted RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 CD48P09326 243 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 GNAT1P11488 350 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 ATF7P17544 494 aaPredicted RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 CAPN2P17655 700 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 KLRC2P26717 231 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 GBP1P32455 592 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 RGS7P49802 495 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 COPS2P61201 443 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 TAZQ16635 292 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 TFDP3Q5H9I0 405 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 EMC10Q5UCC4 262 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 FAM183BPQ6ZVS7 135 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 SYDE1Q6ZW31 735 aaPredicted RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 CYP4V2Q6ZWL3 525 aaPredicted RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 SLC35F5Q8WV83 523 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 ZWILCHQ9H900 591 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 C2CD4BA6NLJ0 364 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 DCDC2CA8MYV0 355 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 KPNA7A9QM74 516 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 CHRNA1P02708 482 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 ITIH2P19823 946 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 MIPP30301 263 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 CHKAP35790 457 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 AFF1P51825 1210 aaKnown RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 MRPS6P82932 125 aaKnown RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 FBXO47Q5MNV8 452 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 FAM102AQ5T9C2 384 aaPredicted RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 SESTD1Q86VW0 696 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 CCDC114Q96M63 670 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 ZFP42Q96MM3 310 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 PWWP2AQ96N64 755 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 PEBP4Q96S96 227 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 MTG1Q9BT17 334 aaPredicted RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 SLC4A5Q9BY07 1137 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 UPF3AQ9H1J1 476 aaKnown RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 GDAP2Q9NXN4 497 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 DDX56Q9NY93 547 aaKnown RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 SAE1Q9UBE0 346 aaPredicted RBP6.89□□□□□ -1.31
USP47-201ENST00000305481 ASIC3Q9UHC3 531 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 CDY2AQ9Y6F7 541 aa6.89□□□□□ -1.31
USP47-201ENST00000305481 GRAP2O75791 330 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 TJP3O95049 919 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CD4P01730 458 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 PDGFRBP09619 1106 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 NUDT17P0C025 328 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 KDELR1P24390 212 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 VPS41P49754 854 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 ZNF143P52747 638 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 ITGA8P53708 1063 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 FCGRTP55899 365 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 NKX3-2P78367 333 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 SKOR1P84550 965 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 PRKCZQ05513 592 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CACNB2Q08289 660 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 SLC29A2Q14542 456 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 ZFYVE27Q5T4F4 411 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 TTC19Q6DKK2 380 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 DRICH1Q6PGQ1 229 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 OLFML1Q6UWY5 402 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 TMEM110Q86TL2 294 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 GSTCDQ8NEC7 633 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 OR6B3Q8NGW1 331 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 GRK7Q8WTQ7 553 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 SNF8Q96H20 258 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 B3GNT5Q9BYG0 378 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CACNG4Q9UBN1 327 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 PCSK1NQ9UHG2 260 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 ABT1Q9ULW3 272 aaKnown RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 ST3GAL5Q9UNP4 418 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 GRIN2DO15399 1336 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 KPNA6O60684 536 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 ADAMTS4O75173 837 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 TRUB2O95900 331 aaKnown RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 MYZAPP0CAP1 466 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 ZSCAN5DPP0CG00 497 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 RARGP13631 454 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CCDC130P13994 396 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 LILRA4P59901 499 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 BYSLQ13895 437 aaKnown RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 OASLQ15646 514 aaKnown RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 C15orf59Q2T9L4 293 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 CCDC14Q49A88 953 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 TWF2Q6IBS0 349 aaKnown RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 OR6B2Q6IFH4 312 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 UNC93AQ86WB7 457 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CRYBG2Q8N1P7 616 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CMASQ8NFW8 434 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 RXFP2Q8WXD0 754 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 HAUS1Q96CS2 278 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 SENP6Q9GZR1 1112 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 ADAM7Q9H2U9 754 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 FEZ2Q9UHY8 353 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms