RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 STAT5BP51692 787 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 ADRM1Q16186 407 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 ZCWPW2Q504Y3 356 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 ZCCHC8Q6NZY4 707 aaKnown RBP10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SH2D3CQ8N5H7 860 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 NACC2Q96BF6 587 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF333Q96JL9 665 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SHCBP1LQ9BZQ2 653 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 GOLPH3Q9H4A6 298 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 POLG2Q9UHN1 485 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 SNX13Q9Y5W8 968 aa10.77□□□□□ -0.69
CLIP1-201ENST00000302528 H3BMM5 538 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 SMNDC1O75940 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 IL6P05231 212 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 TNNI3P19429 210 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 ORC2Q13416 577 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 C10orf120Q5SQS8 335 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 MROH9Q5TGP6 573 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 C12orf60Q5U649 245 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 KCNV1Q6PIU1 500 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 BTN2A1Q7KYR7 527 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 SUGP1Q8IWZ8 645 aaKnown RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 ATG16L2Q8NAA4 619 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 SLC35G2Q8TBE7 412 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 VPS33AQ96AX1 596 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 OSBPL8Q9BZF1 889 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 TUFT1Q9NNX1 390 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 PTCH1Q13635 1447 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 KRT6AP02538 564 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 KRT6BP04259 564 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 IL12RB1P42701 662 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 GPR1P46091 355 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 KRT6CP48668 564 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 AGAP9Q5VTM2 703 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 SPATA18Q8TC71 538 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 ARMC7Q9H6L4 198 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 KLHL28Q9NXS3 571 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 SMARCAL1Q9NZC9 954 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 PIM2Q9P1W9 311 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 VAV3Q9UKW4 847 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 A0A087X0T9 212 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 GNG14A0A1W2PPG7 69 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 NCF1BA6NI72 391 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 C2orf81A6NN90 581 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 NCF1CA8MVU1 366 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 CYP2D6P10635 497 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 NCF1P14598 390 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 ACADSBP45954 432 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 OTUD4Q01804 1114 aaKnown RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 CCNIQ14094 377 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 TMEM132BQ14DG7 1078 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 CACTIN-AS1Q8N1I8 211 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 ILKAPQ9H0C8 392 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 SLITRK2Q9H156 845 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 KCTD10Q9H3F6 313 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 NAGPAQ9UK23 515 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 KANSL1LA0AUZ9 987 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 TMEM120BA0PK00 339 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 FAM220BPB1ANY3 271 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 MTSS1O43312 755 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 AKAP5P24588 427 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 YWHABP31946 246 aaKnown RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 MAGEA4P43358 317 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 ARF5P84085 180 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 PLCL1Q15111 1095 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 DGKDQ16760 1214 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 PEG10Q86TG7 708 aaKnown RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 LINC00523Q86TU6 105 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 FAM9CQ8IZT9 166 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 CCDC3Q9BQI4 270 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 TRPC4Q9UBN4 977 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 CD4P01730 458 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 PRR29P0C7W0 189 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 RHAGQ02094 409 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 TGM3Q08188 693 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 PUDPQ08623 228 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 CBFBQ13951 182 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 NFYCQ13952 458 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 APOBEC3FQ8IUX4 373 aaKnown RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 SLITRK1Q96PX8 696 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 CXorf56Q9H5V9 222 aa10.76□□□□□ -0.69
CLIP1-201ENST00000302528 JPH1Q9HDC5 661 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF335Q9H4Z2 1342 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 FAM196BA6NMK8 535 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MEI4A8MW99 385 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 SMAPO00193 183 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 LARGE1O95461 756 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ITGA4P13612 1032 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 CCDC130P13994 396 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF24P17028 368 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PBLDP30039 288 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 TRAF2Q12933 501 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 POLD3Q15054 466 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 RCN1Q15293 331 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ATP6AP1LQ52LC2 224 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms