RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CEP135Q66GS9 1140 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 ITIH5Q86UX2 942 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 FAM186BQ8IYM0 893 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 ELMOD1Q8N336 334 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 B3GALNT2Q8NCR0 500 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 PJA1Q8NG27 643 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 SLC35C1Q96A29 364 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 CLDN23Q96B33 292 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 C8orf48Q96LL4 319 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 FOXQ1Q9C009 403 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 ZNF518BQ9C0D4 1074 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 TASP1Q9H6P5 420 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 ZFP14Q9HCL3 533 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 CSNK1G1Q9HCP0 422 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 CA14Q9ULX7 337 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 CCL26Q9Y258 94 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 OTOL1A6NHN0 477 aaPredicted RBP12.01□□□□□ -0.49
CLCC1-201ENST00000302500 HHLA1C9JL84 531 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 CLDN5O00501 218 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 PMM2O15305 246 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 SLC16A3O15427 465 aaKnown RBP12.01□□□□□ -0.49
CLCC1-201ENST00000302500 BEST1O76090 585 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 KIF20AO95235 890 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 FGF19O95750 216 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 PDGFRBP09619 1106 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 CSH1P0DML2 217 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 CSH2P0DML3 217 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 TCF3P15923 654 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 BDNFP23560 247 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 GTF2H1P32780 548 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 GNL1P36915 607 aaPredicted RBP12.01□□□□□ -0.49
CLCC1-201ENST00000302500 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
CLCC1-201ENST00000302500 PRKCQQ04759 706 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 LRRC63Q05C16 580 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 GRM2Q14416 872 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 MLF2Q15773 248 aaPredicted RBP12.01□□□□□ -0.49
CLCC1-201ENST00000302500 SGSM1Q2NKQ1 1148 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 ZNF699Q32M78 642 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 MDH1BQ5I0G3 518 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 SUGP1Q8IWZ8 645 aaKnown RBP12.01□□□□□ -0.49
CLCC1-201ENST00000302500 CMTM8Q8IZV2 173 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 LMO3Q8TAP4 145 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 DEPDC1BQ8WUY9 529 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 USP13Q92995 863 aaPredicted RBP12.01□□□□□ -0.49
CLCC1-201ENST00000302500 FAXDC2Q96IV6 333 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 FAM83CQ9BQN1 747 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 OSBPL6Q9BZF3 934 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 TMEM8AQ9HCN3 771 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 HEBP1Q9NRV9 189 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 RMND1Q9NWS8 449 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 CHMP5Q9NZZ3 219 aa12.01□□□□□ -0.49
CLCC1-201ENST00000302500 KANSL1LA0AUZ9 987 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 PROB1E7EW31 1015 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 CHADO15335 359 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 CILPO75339 1184 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 ZDHHC11BP0C7U3 371 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
CLCC1-201ENST00000302500 CCNE1P24864 410 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 TARSP26639 723 aaKnown RBP12□□□□□ -0.49
CLCC1-201ENST00000302500 CDC25CP30307 473 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 PGFP49763 221 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 RPL10AP62906 217 aaKnown RBP12□□□□□ -0.49
CLCC1-201ENST00000302500 ZNF268Q14587 947 aaPredicted RBP12□□□□□ -0.49
CLCC1-201ENST00000302500 ZNF667Q5HYK9 610 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 GPR158Q5T848 1215 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 SNX30Q5VWJ9 437 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 MON1AQ86VX9 555 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 NELL1Q92832 810 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 SMARCE1Q969G3 411 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 ZFRQ96KR1 1074 aaKnown RBP12□□□□□ -0.49
CLCC1-201ENST00000302500 MMS19Q96T76 1030 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 SMG9Q9H0W8 520 aaKnown RBP12□□□□□ -0.49
CLCC1-201ENST00000302500 ATXN3LQ9H3M9 355 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 HPS4Q9NQG7 708 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 NXF1Q9UBU9 619 aaKnown RBP12□□□□□ -0.49
CLCC1-201ENST00000302500 FRMD4BQ9Y2L6 1034 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 FAM186AA6NE01 2351 aa12□□□□□ -0.49
CLCC1-201ENST00000302500 MYOFQ9NZM1 2061 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 F8VP50 259 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 OAS1P00973 400 aaKnown RBP11.99□□□□□ -0.49
CLCC1-201ENST00000302500 TDGF1P13385 188 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 CD72P21854 359 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 DDX6P26196 483 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLCC1-201ENST00000302500 RPL13P26373 211 aaKnown RBP11.99□□□□□ -0.49
CLCC1-201ENST00000302500 NDST1P52848 882 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 UBE2HP62256 183 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 TNNC1P63316 161 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 FKBP3Q00688 224 aaKnown RBP11.99□□□□□ -0.49
CLCC1-201ENST00000302500 USP4Q13107 963 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 BIRC3Q13489 604 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 MAPRE1Q15691 268 aaKnown RBP11.99□□□□□ -0.49
CLCC1-201ENST00000302500 ZNF77Q15935 545 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 GAB4Q2WGN9 574 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 TXNDC8Q6A555 127 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 TXNDC11Q6PKC3 985 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 C4orf50Q6ZRC1 276 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 FAM35AQ86V20 835 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 UNC93AQ86WB7 457 aa11.99□□□□□ -0.49
CLCC1-201ENST00000302500 SPATA2LQ8IUW3 424 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms