RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OATP04181 439 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 RARBP10826 455 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 GARSP41250 739 aaKnown RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 SNX16P57768 344 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 RASA2Q15283 850 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 SNX30Q5VWJ9 437 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 YTHDF3Q7Z739 585 aaKnown RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 ECHDC2Q86YB7 292 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 TRIM42Q8IWZ5 723 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 SCUBE3Q8IX30 993 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 USP6NLQ92738 828 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 FGD4Q96M96 766 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 NOD1Q9Y239 953 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 GOLGA8CPA6NN73 597 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 CHRNB2P17787 502 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 VCPP55072 806 aaKnown RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 ARPP19P56211 112 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 DALRD3Q5D0E6 543 aaKnown RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 GJC2Q5T442 439 aaPredicted RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 RXFP2Q8WXD0 754 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 LRGUKQ96M69 825 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 ZCWPW1Q9H0M4 648 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 IL1RAPL1Q9NZN1 696 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 NR2E3Q9Y5X4 410 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 CNTRLQ7Z7A1 2325 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 KRT36O76013 467 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 SEC24DO94855 1032 aaPredicted RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 SNRPAP09012 282 aaKnown RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 RFC5P40937 340 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 GMPSP49915 693 aaPredicted RBP13.88□□□□□ -0.19
CASC4-201ENST00000299957 TMED1Q13445 227 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 HIC1Q14526 733 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 WWP1Q9H0M0 922 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 ELP3Q9H9T3 547 aa13.88□□□□□ -0.19
CASC4-201ENST00000299957 E9PBE3 544 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 ADCY3O60266 1144 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 KLHL41O60662 606 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 CST3P01034 146 aaPredicted RBP13.87□□□□□ -0.19
CASC4-201ENST00000299957 MSX2P35548 267 aaPredicted RBP13.87□□□□□ -0.19
CASC4-201ENST00000299957 MRPS9P82933 396 aaKnown RBP13.87□□□□□ -0.19
CASC4-201ENST00000299957 PLEKHO2Q8TD55 490 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 SEPT1Q8WYJ6 367 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.87□□□□□ -0.19
CASC4-201ENST00000299957 HACL1Q9UJ83 578 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 FCHO1O14526 889 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 AP2B1P63010 937 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 OCRLQ01968 901 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 DENND1BQ6P3S1 775 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 DEFB132Q7Z7B7 95 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 MIEF2Q96C03 454 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 GGA3Q9NZ52 723 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 USP18Q9UMW8 372 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 NCANO14594 1321 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 PSTPIP1O43586 416 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 MYCP01106 439 aaPredicted RBP13.87□□□□□ -0.19
CASC4-201ENST00000299957 PTGIRP43119 386 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 GAD2Q05329 585 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 NFIL3Q16649 462 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 FASTKD1Q53R41 847 aaKnown RBP13.87□□□□□ -0.19
CASC4-201ENST00000299957 TCHHL1Q5QJ38 904 aaPredicted RBP13.87□□□□□ -0.19
CASC4-201ENST00000299957 THEMIS2Q5TEJ8 643 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 TXNRD3NBQ6F5E7 133 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 SLC30A9Q6PML9 568 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 DCPSQ96C86 337 aaKnown RBP13.87□□□□□ -0.19
CASC4-201ENST00000299957 ZDHHC18Q9NUE0 388 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
CASC4-201ENST00000299957 SNED1Q8TER0 1413 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 KCNK1O00180 336 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 TPST1O60507 370 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 HOXA10P31260 410 aaPredicted RBP13.86□□□□□ -0.19
CASC4-201ENST00000299957 AVPR1AP37288 418 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 PRAMEP78395 509 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 IL1RL1Q01638 556 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 TEX9Q8N6V9 391 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 ADAM32Q8TC27 787 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 LPAR1Q92633 364 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 DNAJC8O75937 253 aaPredicted RBP13.86□□□□□ -0.19
CASC4-201ENST00000299957 GHRP10912 638 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 GNAT1P11488 350 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 MIPP30301 263 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 ADSSP30520 456 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 FOXN2P32314 431 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 MAP7Q14244 749 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 MTFR1Q15390 333 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 KRT80Q6KB66 452 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 C4orf50Q6ZRC1 276 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 IFNEQ86WN2 208 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 MAP4K3Q8IVH8 894 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 FBXO16Q8IX29 292 aaPredicted RBP13.86□□□□□ -0.19
CASC4-201ENST00000299957 C3orf20Q8ND61 904 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 JOSD2Q8TAC2 188 aa13.86□□□□□ -0.19
CASC4-201ENST00000299957 CLPTM1LQ96KA5 538 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms