RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MAP3K10Q02779 954 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 MGAT5Q09328 741 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 ZNF252P-AS1Q0IIN9 211 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 SPARCL1Q14515 664 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 TFDP3Q5H9I0 405 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 XRRA1Q6P2D8 792 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 ZC3H18Q86VM9 953 aaKnown RBP14.1□□□□□ -0.15
CTDP1-202ENST00000299543 RFX6Q8HWS3 928 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 LRRN4Q8WUT4 740 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 GINM1Q9NU53 330 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 CFAP73A6NFT4 308 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 CALB1P05937 261 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 KRT3P12035 628 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 GDF10P55107 478 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 IGBP1P78318 339 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 PTP4A2Q12974 167 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 SLC1A5Q15758 541 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 DBN1Q16643 649 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 HIF1AQ16665 826 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 LY6KQ17RY6 165 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 DUOXA2Q1HG44 320 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 WDR72Q3MJ13 1102 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 EAPPQ56P03 285 aaPredicted RBP14.1□□□□□ -0.15
CTDP1-202ENST00000299543 CGB2Q6NT52 195 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 C3orf62Q6ZUJ4 267 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 JOSD2Q8TAC2 188 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 PIM2Q9P1W9 311 aa14.1□□□□□ -0.15
CTDP1-202ENST00000299543 PFDN1O60925 122 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 CD48P09326 243 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 TGFB2P61812 414 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 CDO1Q16878 200 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 ANKRD22Q5VYY1 191 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 DENND1BQ6P3S1 775 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 LVRNQ6Q4G3 990 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 TRABD2AQ86V40 505 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 KCTD6Q8NC69 237 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 DHX33Q9H6R0 707 aaKnown RBP14.09□□□□□ -0.15
CTDP1-202ENST00000299543 RXFP1Q9HBX9 757 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 GRAP2O75791 330 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 RXRBP28702 533 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 BNIP1Q12981 228 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 ALLCQ8N6M5 410 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 FAM71DQ8N9W8 422 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 MAML1Q92585 1016 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 VCPIP1Q96JH7 1222 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 PLEKHG4BQ96PX9 1271 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 PHACTR1Q9C0D0 580 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 MYLK2Q9H1R3 596 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 ASB3Q9Y575 518 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 CNTNAP2Q9UHC6 1331 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 RBBP6Q7Z6E9 1792 aaKnown RBP14.09□□□□□ -0.15
CTDP1-202ENST00000299543 ENTPD5O75356 428 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 TCF7P36402 384 aaPredicted RBP14.09□□□□□ -0.15
CTDP1-202ENST00000299543 VCPP55072 806 aaKnown RBP14.09□□□□□ -0.15
CTDP1-202ENST00000299543 RTP1P59025 263 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 GHRHRQ02643 423 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 MYBPC3Q14896 1274 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 MTFR1Q15390 333 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 TAF5Q15542 800 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 GBP7Q8N8V2 638 aaPredicted RBP14.09□□□□□ -0.15
CTDP1-202ENST00000299543 ZBED3Q96IU2 234 aaPredicted RBP14.09□□□□□ -0.15
CTDP1-202ENST00000299543 LRRC37BQ96QE4 947 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 NPHS2Q9NP85 383 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 BLOC1S6Q9UL45 172 aa14.09□□□□□ -0.15
CTDP1-202ENST00000299543 hCG_1818297A0A087WSY0 165 aa14.08□□□□□ -0.15
CTDP1-202ENST00000299543 NOP56O00567 594 aaKnown RBP14.08□□□□□ -0.15
CTDP1-202ENST00000299543 ADCY3O60266 1144 aa14.08□□□□□ -0.15
CTDP1-202ENST00000299543 UBA1P22314 1058 aaKnown RBP14.08□□□□□ -0.15
CTDP1-202ENST00000299543 SERPINB4P48594 390 aa14.08□□□□□ -0.15
CTDP1-202ENST00000299543 ANKLE1Q8NAG6 615 aa14.08□□□□□ -0.15
CTDP1-202ENST00000299543 ABTB1Q969K4 478 aaPredicted RBP14.08□□□□□ -0.15
CTDP1-202ENST00000299543 FGD4Q96M96 766 aa14.08□□□□□ -0.15
CTDP1-202ENST00000299543 NIF3L1Q9GZT8 377 aa14.08□□□□□ -0.15
CTDP1-202ENST00000299543 DOCK5Q9H7D0 1870 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 ASS1P00966 412 aaKnown RBP14.08□□□□□ -0.16
CTDP1-202ENST00000299543 PRKCBP05771 671 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 ARL2P36404 184 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 MAPK6Q16659 721 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 MAK16Q9BXY0 300 aaKnown RBP14.08□□□□□ -0.16
CTDP1-202ENST00000299543 CHMP2BQ9UQN3 213 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 B4GALT5O43286 388 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 CBX6O95503 412 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 DEUP1Q05D60 604 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 SCYL2Q6P3W7 929 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 RFX8Q6ZV50 586 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 WDTC1Q8N5D0 677 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 NUDCD1Q96RS6 583 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 MRPL4Q9BYD3 311 aaKnown RBP14.08□□□□□ -0.16
CTDP1-202ENST00000299543 HOXC10Q9NYD6 342 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 GRID1Q9ULK0 1009 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 PCDHGA4Q9Y5G9 962 aa14.08□□□□□ -0.16
CTDP1-202ENST00000299543 TCRBV7S3A2A0A539 114 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 OAS1P00973 400 aaKnown RBP14.07□□□□□ -0.16
CTDP1-202ENST00000299543 IL1R2P27930 398 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 PTPN20Q4JDL3 420 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 MSS51Q4VC12 460 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 DALRD3Q5D0E6 543 aaKnown RBP14.07□□□□□ -0.16
CTDP1-202ENST00000299543 FNBP1LQ5T0N5 605 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 ARL10Q8N8L6 244 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 UBA3Q8TBC4 463 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms