RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NEK10Q6ZWH5 1172 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 DEFB107AQ8IZN7 70 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 PABPC5Q96DU9 382 aaKnown RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 ALDH8A1Q9H2A2 487 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 CEP170Q5SW79 1584 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 NCALDP61601 193 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 RPS7P62081 194 aaKnown RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 HPCAP84074 193 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 NFYCQ13952 458 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 KLHL12Q53G59 568 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 RCSD1Q6JBY9 416 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 ZFRQ96KR1 1074 aaKnown RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 MMADHCQ9H3L0 296 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 SERHL2Q9H4I8 314 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 SERHLQ9NQF3 203 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 TJP2Q9UDY2 1190 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 ADAM30Q9UKF2 790 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 GLRA3O75311 464 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 SUPT7LO94864 414 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 EYA4O95677 639 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 SFNP31947 248 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 GALNTL6Q49A17 601 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 ZNF57Q68EA5 555 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 DENND1BQ6P3S1 775 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 SYTL1Q8IYJ3 562 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 RAB42Q8N4Z0 105 aa15.4■□□□□ 0.06
SCN3B-201ENST00000299333 RBM46Q8TBY0 533 aaKnown RBP15.4■□□□□ 0.06
SCN3B-201ENST00000299333 TNFAIP8O95379 198 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 PRLP01236 227 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 RAD51Q06609 339 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 CYP51A1Q16850 503 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 TCHHL1Q5QJ38 904 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FAXCQ5TGI0 409 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 PDPK2PQ6A1A2 396 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FOXR1Q6PIV2 292 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 LRRC74BQ6ZQY2 392 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 TAF8Q7Z7C8 310 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 SLC13A5Q86YT5 568 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ENKURQ8TC29 256 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 WDR35Q9P2L0 1181 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 C2CD2Q9Y426 696 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 SLC30A1Q9Y6M5 507 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 STX7O15400 261 aaKnown RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 BGNP21810 368 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ITGADQ13349 1161 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 TBCELQ5QJ74 424 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ADGRF4Q8IZF3 695 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 EFHBQ8N7U6 833 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 TPCN2Q8NHX9 752 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 SEPT1Q8WYJ6 367 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 RNFT2Q96EX2 444 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 CCDC28BQ9BUN5 200 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 PIF1Q9H611 641 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ATP6V1HQ9UI12 483 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 PDS5AQ29RF7 1337 aaKnown RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FAM20BO75063 409 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 CACNB3P54284 484 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 EZH2Q15910 746 aaKnown RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 TMED8Q6PL24 325 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FBXO36Q8NEA4 188 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 SH3TC2Q8TF17 1288 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 NR5A2O00482 541 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ATP4AP20648 1035 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FAM83EQ2M2I3 478 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 KCTD17Q8N5Z5 321 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 C7orf25Q9BPX7 421 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 SNTNA6NMZ2 147 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 IL6STP40189 918 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ACOT2P49753 483 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ZNF467Q7Z7K2 595 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FOXP4Q8IVH2 680 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 SCFD2Q8WU76 684 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 ATG4AQ8WYN0 398 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FOPNLQ96NB1 174 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 RSAD1Q9HA92 442 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 SPASTQ9UBP0 616 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-201ENST00000299333 TMEM2Q9UHN6 1383 aa15.39■□□□□ 0.05
SCN3B-201ENST00000299333 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 KANSL1LA0AUZ9 987 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 MEI4A8MW99 385 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 ASMTLO95671 621 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 S100A6P06703 90 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 FNTAP49354 379 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 SIK1P57059 783 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 PTRHD1Q6GMV3 140 aaKnown RBP15.38■□□□□ 0.05
SCN3B-201ENST00000299333 TYW3Q6IPR3 259 aaKnown RBP15.38■□□□□ 0.05
SCN3B-201ENST00000299333 RABGEF1Q9UJ41 708 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 CARD8Q9Y2G2 431 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 CDK12Q9NYV4 1490 aaPredicted RBP15.38■□□□□ 0.05
SCN3B-201ENST00000299333 ZNF682O95780 498 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 MYBP10242 640 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 RRM2P31350 389 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 ERVK-24P63145 666 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 MTFR1Q15390 333 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 ZSWIM7Q19AV6 140 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 USP39Q53GS9 565 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms