RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.21□□□□□ -0.13
TTC39B-201ENST00000297615 WHRNQ9P202 907 aa14.21□□□□□ -0.13
TTC39B-201ENST00000297615 A0A1W2PPM1 405 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 SPDYE5A6NIY4 337 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 H0YCG3 227 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 I3L4J1 428 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 CLDN5O00501 218 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 ATP2A1O14983 1001 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 MTA2O94776 668 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 CELF2O95319 508 aaKnown RBP14.21□□□□□ -0.14
TTC39B-201ENST00000297615 NEFHP12036 1026 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 SMPD1P17405 629 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 LMO2P25791 158 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 CDC25CP30307 473 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 ICAM3P32942 547 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 RAD23BP54727 409 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 PKN2Q16513 984 aaKnown RBP14.21□□□□□ -0.14
TTC39B-201ENST00000297615 ZNF449Q6P9G9 518 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 SPOCD1Q6ZMY3 1216 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 ARMC9Q7Z3E5 817 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 OR6J1Q8NGC5 347 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 RMDN2Q96LZ7 410 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 ECT2Q9H8V3 914 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 IL1RAPL1Q9NZN1 696 aa14.21□□□□□ -0.14
TTC39B-201ENST00000297615 ZNF646O15015 1829 aaPredicted RBP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 CA4P22748 312 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 MIPP30301 263 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 SH3D19Q5HYK7 790 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 CCDC62Q6P9F0 684 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 WDR49Q8IV35 697 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 RSAD2Q8WXG1 361 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 ZFP42Q96MM3 310 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 SLITRK1Q96PX8 696 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 CCDC77Q9BR77 488 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 GINM1Q9NU53 330 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 MFHAS1Q9Y4C4 1052 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 RBBP6Q7Z6E9 1792 aaKnown RBP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 FAM189A1O60320 539 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 LRCH4O75427 683 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 PAEPP09466 180 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 TBXAS1P24557 533 aaPredicted RBP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 EFNA5P52803 228 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 ARHGAP1Q07960 439 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 PTK6Q13882 451 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 PPP2R5DQ14738 602 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 PPP1R26Q5T8A7 1209 aaPredicted RBP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 YTHDF3Q7Z739 585 aaKnown RBP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 SPNS2Q8IVW8 549 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 ACTR5Q9H9F9 607 aaPredicted RBP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 DPP3Q9NY33 737 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 TSPAN16Q9UKR8 245 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 CHMP2BQ9UQN3 213 aa14.2□□□□□ -0.14
TTC39B-201ENST00000297615 PIN4Q9Y237 131 aaKnown RBP14.2□□□□□ -0.14
TTC39B-201ENST00000297615 IGKV6D-21A0A0A0MT36 114 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 HBP1O60381 514 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 SNX3O60493 162 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 C22orf31O95567 290 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 MYL3P08590 195 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 GBP1P32455 592 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 PTPN11Q06124 597 aaPredicted RBP14.19□□□□□ -0.14
TTC39B-201ENST00000297615 TMEM132DQ14C87 1099 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 MSS51Q4VC12 460 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 ILDR2Q71H61 639 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 ENOSF1Q7L5Y1 443 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 CCDC125Q86Z20 511 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 SLC4A11Q8NBS3 891 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 STKLD1Q8NE28 680 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 NPLOC4Q8TAT6 608 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 BRI3BPQ8WY22 251 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 KLHL29Q96CT2 875 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 PITPNM3Q9BZ71 974 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 IP6K2Q9UHH9 426 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 USP15Q9Y4E8 981 aaPredicted RBP14.19□□□□□ -0.14
TTC39B-201ENST00000297615 IGF2BP3O00425 579 aaKnown RBP eCLIP14.19□□□□□ -0.14
TTC39B-201ENST00000297615 MAPK13O15264 365 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 FAM155BO75949 473 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 CYP3A5P20815 502 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 CRADDP78560 199 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 OVGP1Q12889 678 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 SNAPC2Q13487 334 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 TFDP1Q14186 410 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 CA9Q16790 459 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 PLEKHA7Q6IQ23 1121 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 CTAGE3PQ8IX95 158 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 RXFP2Q8WXD0 754 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.143e-6■■■■□ 22
TTC39B-201ENST00000297615 SGSM3Q96HU1 749 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 ACAP3Q96P50 834 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 PDZD7Q9H5P4 517 aa14.19□□□□□ -0.14
TTC39B-201ENST00000297615 C5orf60A6NFR6 353 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 RASSF9O75901 435 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SNAI1O95863 264 aaPredicted RBP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 EDNRBP24530 442 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 GMPRP36959 345 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 GRIK4Q16099 956 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SEPT7Q16181 437 aaKnown RBP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 PMF1Q6P1K2 205 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 DARS2Q6PI48 645 aaKnown RBP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SPATA21Q7Z572 469 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms