RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 C16orf46Q6P387 395 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 RGS9BPQ6ZS82 235 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 SAMD7Q7Z3H4 446 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 NUDCD3Q8IVD9 361 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 MCPH1Q8NEM0 835 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 RNF217Q8TC41 542 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 SLC26A7Q8TE54 656 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 TTC25Q96NG3 672 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 CCDC22O60826 627 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZMPSTE24O75844 475 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 VCPP55072 806 aaKnown RBP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 PSMD6Q15008 389 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 IL1RAPL1Q9NZN1 696 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 TXNDC16Q9P2K2 825 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 FIS1Q9Y3D6 152 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 CFLARO15519 480 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 EXTL3O43909 919 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 DGAT1O75907 488 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZBED1O96006 694 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 UNGP13051 313 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 SESN2P58004 480 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 POLNQ7Z5Q5 900 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 CLNKQ7Z7G1 428 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 C4orf19Q8IY42 314 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZNF483Q8TF39 744 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 FAM151AQ8WW52 585 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 SMYD2Q9NRG4 433 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 PEX11AO75192 247 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ETS2P15036 469 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ATP4AP20648 1035 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PTPN4P29074 926 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 RPL22P35268 128 aaKnown RBP13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ABL2P42684 1182 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 TUBP50607 506 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PDE1BQ01064 536 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 OGDHQ02218 1023 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PDK4Q16654 411 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 GRAMD1BQ3KR37 738 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 TMEM63BQ5T3F8 832 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 IL31Q6EBC2 164 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 SYDE1Q6ZW31 735 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PRPF39Q86UA1 669 aaKnown RBP13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ADPGKQ9BRR6 497 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PICK1Q9NRD5 415 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 IQANK1A0A1B0GTG1 560 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 FCHO1O14526 889 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 SLC26A4O43511 780 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PSTPIP1O43586 416 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PDE5AO76074 875 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 FGFR1P11362 822 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PEX6Q13608 980 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 RASA2Q15283 850 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 C15orf59Q2T9L4 293 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 RNF43Q68DV7 783 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 RHBDF2Q6PJF5 856 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 NCAPG2Q86XI2 1143 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 NDUFAF2Q8N183 169 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 NSL1Q96IY1 281 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 NMRK1Q9NWW6 199 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 WNK3Q9BYP7 1800 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 SMNDC1O75940 238 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 TPBGLP0DKB5 382 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 NUMBP49757 651 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 AQP5P55064 265 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 GCNT1Q02742 428 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PLEKHG4Q58EX7 1191 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 SH3PXD2AQ5TCZ1 1133 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 CES3Q6UWW8 571 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 SESTD1Q86VW0 696 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 NIM1KQ8IY84 436 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 TMEM109Q9BVC6 243 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 NMUR2Q9GZQ4 415 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 IFT122Q9HBG6 1241 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZNF302Q9NR11 478 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 PXMP2Q9NR77 195 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 FAM49BQ9NUQ9 324 aa13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZC3H7BQ9UGR2 993 aaKnown RBP13.92□□□□□ -0.18
TNFRSF21-201ENST00000296861 TP73O15350 636 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 GRIN3BO60391 1043 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 ATP5HO75947 161 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 CNTN2Q02246 1040 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 AMHR2Q16671 573 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 PAPOLBQ9NRJ5 636 aaKnown RBP13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 INPP5FQ9Y2H2 1132 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 DDX60LQ5H9U9 1706 aaKnown RBP13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZNF541Q9H0D2 1346 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 MAPTP10636 758 aaKnown RBP13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 BLMHQ13867 455 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZNF568Q3ZCX4 644 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 MON1BQ7L1V2 547 aa13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 SDCCAG8Q86SQ7 713 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF21-201ENST00000296861 CCNYQ8ND76 341 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms