RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 TTMPQ5BVD1 217 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 C4orf22Q6V702 233 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 TMEM169Q96HH4 297 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 CCDC134Q9H6E4 229 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 RXFP1Q9HBX9 757 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 NAALADL1Q9UQQ1 740 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 ST8SIA6P61647 398 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 KCNA1Q09470 495 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 SNX17Q15036 470 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 TBCCQ15814 346 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 EXD1Q8NHP7 514 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 ZNF669Q96BR6 464 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 TMEM121Q9BTD3 319 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 ARHGEF38Q9NXL2 777 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 CXCL11O14625 94 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 COBLL1Q53SF7 1204 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 MTDHQ86UE4 582 aaKnown RBP16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 TMC2Q8TDI7 906 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 SNX19Q92543 992 aa16.69■□□□□ 0.26
ARHGEF28-201ENST00000296794 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 VCAM1P19320 739 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 THPOP40225 353 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 IFI35P80217 286 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 CLEC16AQ2KHT3 1053 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 CDR2LQ86X02 465 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 FRMD8P1Q9BZ68 369 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 ASAP3Q8TDY4 903 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 OPTNQ96CV9 577 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 HPDLQ96IR7 371 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 PCDHB7Q9Y5E2 793 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 WDR59Q6PJI9 974 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 GPC2Q8N158 579 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 PRG3Q9Y2Y8 225 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 PSMD3O43242 534 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 HNRNPCP07910 306 aaKnown RBP eCLIP16.68■□□□□ 0.264e-8■□□□□ 8.5
ARHGEF28-201ENST00000296794 ALDH7A1P49419 539 aaKnown RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 MYBPC2Q14324 1141 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 SPOCD1Q6ZMY3 1216 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 ATPAF2Q8N5M1 289 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 STKLD1Q8NE28 680 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 RMDN1Q96DB5 314 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 THAP11Q96EK4 314 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 SEPT5Q99719 369 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 PCDHGC5Q9Y5F6 944 aa16.68■□□□□ 0.26
ARHGEF28-201ENST00000296794 MANSC4A6NHS7 340 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 CYTH3O43739 400 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 MAP3K6O95382 1288 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 RPLP2P05387 115 aaKnown RBP16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 GARTP22102 1010 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 MGAT5BQ3V5L5 792 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 ZNF484Q5JVG2 852 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 ITGB3P05106 788 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 PYGMP11217 842 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 MCL1Q07820 350 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 TAS2R42Q7RTR8 314 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 SLC5A5Q92911 643 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 ZNF711Q9Y462 761 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 MAGEA13PA6NCF6 341 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 PGK2P07205 417 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 HDAC4P56524 1084 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 DSG1Q02413 1049 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 CYP24A1Q07973 514 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 DCAF6Q58WW2 860 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 KIRREL3Q8IZU9 778 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 EFHBQ8N7U6 833 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 DTNBP1Q96EV8 351 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 MTMR12Q9C0I1 747 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 DCLRE1BQ9H816 532 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 SLC24A2Q9UI40 661 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 SUPT20HL2P0C7V6 817 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 PNPLA4P41247 253 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 ORC1Q13415 861 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 BFSP2Q13515 415 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 DCAF4L1Q3SXM0 396 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 NUP93Q8N1F7 819 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 RRAGCQ9HB90 399 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 SLC39A10Q9ULF5 831 aa16.67■□□□□ 0.26
ARHGEF28-201ENST00000296794 RCCD1A6NED2 376 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 GPR182O15218 404 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 SRP72O76094 671 aaKnown RBP16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 LBRQ14739 615 aaKnown RBP16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 SETD3Q86TU7 594 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 TEKT4Q8WW24 435 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 TSPAN17Q96FV3 270 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 PKD2L2Q9NZM6 624 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 SCHIP1Q9P0W5 487 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 KIF17Q9P2E2 1029 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 PDP2Q9P2J9 529 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 MYBL2P10244 700 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 SERPINB3P29508 390 aa16.66■□□□□ 0.26
ARHGEF28-201ENST00000296794 IFNEQ86WN2 208 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms