RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GCOM2Q9BZD3 368 aaPredicted RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 KIF9Q9HAQ2 790 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 HOMER3Q9NSC5 361 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 TUBGCP4Q9UGJ1 667 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CHMP2BQ9UQN3 213 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CCDC78A2IDD5 438 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 IQCA1LA6NCM1 817 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 TMEM191CA6NGB0 347 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CAPN9O14815 690 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 MCF2LO15068 1137 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CREB3O43889 395 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 PIGRP01833 764 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 ERBB2P04626 1255 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 RARGP13631 454 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CCDC130P13994 396 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CA4P22748 312 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 FNTAP49354 379 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 ATXN1P54253 815 aaKnown RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 C1QBPQ07021 282 aaKnown RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 ARHGAP1Q07960 439 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 TTC31Q49AM3 519 aaPredicted RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 GNASQ5JWF2 1037 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 PLPPR4Q7Z2D5 763 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 LRRC34Q8IZ02 419 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 ADAM32Q8TC27 787 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 P3H4Q92791 437 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 RNF34Q969K3 372 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 MAGEB5Q9BZ81 275 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 IFT122Q9HBG6 1241 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 FGFR1OP2Q9NVK5 253 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 PCYOX1Q9UHG3 505 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 MAGEB2O15479 319 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 C22orf31O95567 290 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 MCL1Q07820 350 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 CBLBQ13191 982 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 CYP1B1Q16678 543 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 MTHFD1LQ6UB35 978 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 LRIG3Q6UXM1 1119 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 WDTC1Q8N5D0 677 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 SLCO2A1Q92959 643 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 XPO6Q96QU8 1125 aaKnown RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 LBHD1Q9BQE6 289 aaPredicted RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 SGIP1Q9BQI5 828 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 MRPL45Q9BRJ2 306 aaKnown RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 TINF2Q9BSI4 451 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 STMN4Q9H169 189 aaPredicted RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 C12orf65Q9H3J6 166 aaKnown RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 CYTH4Q9UIA0 394 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 SIX4Q9UIU6 781 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 CNTN6Q9UQ52 1028 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 IGKV6D-21A0A0A0MT36 114 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 I3L4J1 428 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 PPFIA2O75334 1257 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 APRTP07741 180 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 SDC4P31431 198 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 RAD23BP54727 409 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 PIGHQ14442 188 aaPredicted RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 ZC3H12AQ5D1E8 599 aaKnown RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 TFDP3Q5H9I0 405 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 PLEKHH3Q7Z736 793 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 CEP57Q86XR8 500 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 EXOC8Q8IYI6 725 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 ANKS4BQ8N8V4 417 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 AVENQ9NQS1 362 aaPredicted RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 USP18Q9UMW8 372 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 STK38LQ9Y2H1 464 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 E2F8A0AVK6 867 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 A6NNZ2 444 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 ZBTB42B2RXF5 422 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 TNPO2O14787 897 aaKnown RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 KCNN4O15554 427 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 ASAP2O43150 1006 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 PGK1P00558 417 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 IL1R2P27930 398 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 ASPAP45381 313 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 CTCFP49711 727 aaPredicted RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 AP3M2P53677 418 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 SLC20A2Q08357 652 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 TUBB8Q3ZCM7 444 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 TNFAIP8L3Q5GJ75 292 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 ZNF484Q5JVG2 852 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 PLEKHA7Q6IQ23 1121 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 CCDC62Q6P9F0 684 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 USP50Q70EL3 339 aaPredicted RBP9.76□□□□□ -0.85
PRDM9-201ENST00000296682 EXD1Q8NHP7 514 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 FAF2Q96CS3 445 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 ZFP42Q96MM3 310 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 SLITRK1Q96PX8 696 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 PDZD7Q9H5P4 517 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 RAB6BQ9NRW1 208 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 STRIP2Q9ULQ0 834 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 EVPLQ92817 2033 aa9.76□□□□□ -0.85
PRDM9-201ENST00000296682 TREHO43280 583 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 AVILO75366 819 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 RECQL4O94761 1208 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 BCAR1P56945 870 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 HHATQ5VTY9 493 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms