RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 UNC93AQ86WB7 457 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 TATDN2Q93075 761 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 LRRC3Q9BY71 257 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 BCO2Q9BYV7 579 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 SLITRK6Q9H5Y7 841 aa12.86□□□□□ -0.35
HMGB2-201ENST00000296503 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
HMGB2-201ENST00000296503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.358e-18■■□□□ 13.8
HMGB2-201ENST00000296503 DOCK8Q8NF50 2099 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 ANXA13P27216 316 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 MAGEA11P43364 429 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 KCNH2Q12809 1159 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 LRMPQ12912 555 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 ORC1Q13415 861 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 TMC8Q8IU68 726 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 UBALD2Q8IYN6 164 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 SLC44A3Q8N4M1 653 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 B3GNT5Q9BYG0 378 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 FAM86C2PA6NEL3 165 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 CLDN5O00501 218 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 MOSPD3O75425 235 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 CAVIN2O95810 425 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
HMGB2-201ENST00000296503 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 HTR4Q13639 388 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 TMEM31Q5JXX7 168 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 TRIM67Q6ZTA4 783 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 GAREM2Q75VX8 874 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 CRYBG2Q8N1P7 616 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 SHKBP1Q8TBC3 707 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 FGF14Q92915 247 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 MED15Q96RN5 788 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
HMGB2-201ENST00000296503 NT5C1AQ9BXI3 368 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 GPR88Q9GZN0 384 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 SMOC2Q9H3U7 446 aa12.85□□□□□ -0.35
HMGB2-201ENST00000296503 ANHXE9PGG2 379 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 NRG2O14511 850 aaPredicted RBP12.84□□□□□ -0.35
HMGB2-201ENST00000296503 AFPP02771 609 aaKnown RBP12.84□□□□□ -0.35
HMGB2-201ENST00000296503 CDC25CP30307 473 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
HMGB2-201ENST00000296503 FAXDC2Q96IV6 333 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
HMGB2-201ENST00000296503 ZSWIM3Q96MP5 696 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 KXD1Q9BQD3 176 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 ZNF518BQ9C0D4 1074 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 ELOVL4Q9GZR5 314 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 KCNF1Q9H3M0 494 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 FAM53CQ9NYF3 392 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 HMGXB4Q9UGU5 601 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 ATP8B3O60423 1300 aa12.84□□□□□ -0.35
HMGB2-201ENST00000296503 F8VP50 259 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 TRIM66O15016 1216 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 P4HA2O15460 535 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 GPR37L1O60883 481 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 HMGA1P17096 107 aaKnown RBP12.83□□□□□ -0.36
HMGB2-201ENST00000296503 MTIF2P46199 727 aaKnown RBP12.83□□□□□ -0.36
HMGB2-201ENST00000296503 SIGLEC14Q08ET2 396 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 ZNF394Q53GI3 561 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 CT47A1Q5JQC4 288 aaPredicted RBP12.83□□□□□ -0.36
HMGB2-201ENST00000296503 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 GPR158Q5T848 1215 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 TANGO2Q6ICL3 276 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 POTEHQ6S545 545 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
HMGB2-201ENST00000296503 UXTQ9UBK9 157 aaPredicted RBP12.83□□□□□ -0.36
HMGB2-201ENST00000296503 CCDC66A2RUB6 948 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 PMM2O15305 246 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 NARSO43776 548 aaKnown RBP12.82□□□□□ -0.36
HMGB2-201ENST00000296503 CILPO75339 1184 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 CCDC130P13994 396 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 CYP4F8P98187 520 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 INCA1Q0VD86 236 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 STXBP5Q5T5C0 1151 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
HMGB2-201ENST00000296503 DENND5BQ6ZUT9 1274 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 FAM114A1Q8IWE2 563 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 ZSCAN18Q8TBC5 510 aaPredicted RBP12.82□□□□□ -0.36
HMGB2-201ENST00000296503 SLC2A14Q8TDB8 520 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 SMARCD2Q92925 531 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 CYFIP2Q96F07 1278 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 SPATA17Q96L03 361 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 C8orf48Q96LL4 319 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
HMGB2-201ENST00000296503 ZNF830Q96NB3 372 aaPredicted RBP12.82□□□□□ -0.36
HMGB2-201ENST00000296503 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
HMGB2-201ENST00000296503 TWNKQ96RR1 684 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms