RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 FAM217BQ9NTX9 383 aaPredicted RBP12.91□□□□□ -0.34
SNRK-201ENST00000296088 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
SNRK-201ENST00000296088 EEF2KO00418 725 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 TNFRSF21O75509 655 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 NPR3P17342 541 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 HOXB6P17509 224 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 PPP2R1BP30154 601 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 COILP38432 576 aaPredicted RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 CSE1LP55060 971 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 ALDH6A1Q02252 535 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 XRCC4Q13426 336 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 CCDC153Q494R4 210 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 ATP6AP1LQ52LC2 224 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNRK-201ENST00000296088 EPHX4Q8IUS5 362 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 SPICE1Q8N0Z3 855 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 CENPIQ92674 756 aaPredicted RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 TRIM49D1C9J1S8 452 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 FAM47E-STBD1D6RA91 191 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 MYL4P12829 197 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 RARGP13631 454 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 CDK8P49336 464 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 HIRAP54198 1017 aaPredicted RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 GEMP55040 296 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 ITGB3BPQ13352 177 aaPredicted RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 FBXO42Q6P3S6 717 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 CASP12Q6UXS9 341 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 KYQ8NBH2 561 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 DRG1Q9Y295 367 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 EFCAB10A6NFE3 127 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 BMP10O95393 424 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 PGM3O95394 542 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 LCA5LO95447 670 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 S100A6P06703 90 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 IREB2P48200 963 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 SEC24CP53992 1094 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 RAB2AP61019 212 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 CCZ1BP86790 482 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 CCZ1P86791 482 aaPredicted RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 TGM3Q08188 693 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 ALX1Q15699 326 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 ZNF746Q6NUN9 644 aaPredicted RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 STARD8Q92502 1023 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 HAVCR1Q96D42 359 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 PPP1R36Q96LQ0 422 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 SIK2Q9H0K1 926 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 RBM12Q9NTZ6 932 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 TRMT6Q9UJA5 497 aaKnown RBP12.9□□□□□ -0.34
SNRK-201ENST00000296088 ITSN2Q9NZM3 1697 aa12.9□□□□□ -0.34
SNRK-201ENST00000296088 CLOCKO15516 846 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 VPS4BO75351 444 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 ASMTLO95671 621 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 PTPN7P35236 360 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 TUBA4AP68366 448 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 IL5RAQ01344 420 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 DNAJC3Q13217 504 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.35
SNRK-201ENST00000296088 TYW3Q6IPR3 259 aaKnown RBP12.9□□□□□ -0.35
SNRK-201ENST00000296088 OLFML1Q6UWY5 402 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 WWOXQ9NZC7 414 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 DUSP12Q9UNI6 340 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 COMMD3-BMI1R4GMX3 469 aa12.9□□□□□ -0.35
SNRK-201ENST00000296088 LDLRP01130 860 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 SERPIND1P05546 499 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 CNPP09543 421 aaKnown RBP12.89□□□□□ -0.35
SNRK-201ENST00000296088 TSEN34Q9BSV6 310 aaKnown RBP12.89□□□□□ -0.35
SNRK-201ENST00000296088 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 ATP6V1HQ9UI12 483 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 PTPRTO14522 1441 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 GSAPA4D1B5 854 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 PIK3CDO00329 1044 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 ALOX12P18054 663 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 ATP6V1B2P21281 511 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 HSD17B3P37058 310 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 MACC1Q6ZN28 852 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 STX12Q86Y82 276 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 CACTIN-AS1Q8N1I8 211 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 OSBP2Q969R2 916 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 EPB41L4BQ9H329 900 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 SAR1AQ9NR31 198 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 C15orf41Q9Y2V0 281 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 ZC3H4Q9UPT8 1303 aaKnown RBP12.89□□□□□ -0.35
SNRK-201ENST00000296088 IDH3BO43837 385 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 TBC1D12O60347 775 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 ALDH1A2O94788 518 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 PAICSP22234 425 aaKnown RBP12.89□□□□□ -0.35
SNRK-201ENST00000296088 CASP4P49662 377 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 TRAP1Q12931 704 aaKnown RBP12.89□□□□□ -0.35
SNRK-201ENST00000296088 SLC29A2Q14542 456 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 TBCELQ5QJ74 424 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 TMEM63BQ5T3F8 832 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 ARMC6Q6NXE6 501 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
SNRK-201ENST00000296088 C6orf62Q9GZU0 229 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms