RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 DDX39AO00148 427 aaKnown RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 SNPHO15079 494 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 FOXN1O15353 648 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 CHMP2AO43633 222 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 MED24O75448 989 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 FARP2O94887 1054 aaPredicted RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 HOXC6P09630 235 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 RBP3P10745 1247 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 CD9P21926 228 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 GSSP48637 474 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 KLHL30Q0D2K2 578 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 TUBA3EQ6PEY2 450 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 AADATQ8N5Z0 425 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 RETREG2Q8NC44 543 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 GIPC3Q8TF64 312 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 PAGE5Q96GU1 130 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 EIF2AK1Q9BQI3 630 aaKnown RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 SERHL2Q9H4I8 314 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 SIAEQ9HAT2 523 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 LRRC37A2A6NM11 1700 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 PLXNA1Q9UIW2 1896 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 TNPO2O14787 897 aaKnown RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 STAMBPO95630 424 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 CHEK2O96017 543 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 ALAS2P22557 587 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 PPP1R2P41236 205 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 NR2C2P49116 596 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 C2orf54Q08AI8 447 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 MRPL28Q13084 256 aaKnown RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 KPNB1Q14974 876 aaKnown RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 EPHA7Q15375 998 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 SF3B4Q15427 424 aaKnown RBP eCLIP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 PPP1R2P3Q6NXS1 205 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 CYP4V2Q6ZWL3 525 aaPredicted RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 CAND1Q86VP6 1230 aaKnown RBP12.65□□□□□ -0.38
CAPN13-201ENST00000295055 KSR1Q8IVT5 923 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 CSGALNACT2Q8N6G5 542 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 NT5C3AQ9H0P0 336 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 GGT7Q9UJ14 662 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 KDM3AQ9Y4C1 1321 aa12.65□□□□□ -0.38
CAPN13-201ENST00000295055 SH3PXD2BA1X283 911 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 HDAC3O15379 428 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 SLITRK3O94933 977 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 SNAI1O95863 264 aaPredicted RBP12.65□□□□□ -0.39
CAPN13-201ENST00000295055 CCNE2O96020 404 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 KPNA1P52294 538 aaPredicted RBP12.65□□□□□ -0.39
CAPN13-201ENST00000295055 COPS2P61201 443 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 KRT76Q01546 638 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 CD300CQ08708 224 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 PHKG1Q16816 387 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 C4orf22Q6V702 233 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 PIGWQ7Z7B1 504 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 FLCNQ8NFG4 579 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 PLEKHO2Q8TD55 490 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 PIGOQ8TEQ8 1089 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 SOCS4Q8WXH5 440 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 PMEPA1Q969W9 287 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 CHMP6Q96FZ7 201 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 NUDCD1Q96RS6 583 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 AIFM2Q9BRQ8 373 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 TINF2Q9BSI4 451 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 BLOC1S4Q9NUP1 217 aa12.65□□□□□ -0.39
CAPN13-201ENST00000295055 DOCK3Q8IZD9 2030 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 POTEB3A0JP26 581 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 PDE2AO00408 941 aaPredicted RBP12.64□□□□□ -0.39
CAPN13-201ENST00000295055 CFL1P23528 166 aaKnown RBP12.64□□□□□ -0.39
CAPN13-201ENST00000295055 VPS41P49754 854 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 CLK3P49761 638 aaKnown RBP12.64□□□□□ -0.39
CAPN13-201ENST00000295055 FCGRTP55899 365 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 PNOCQ13519 176 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 MROH7Q68CQ1 1323 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 POTEBQ6S5H4 581 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 MIER3Q7Z3K6 550 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 FBXO16Q8IX29 292 aaPredicted RBP12.64□□□□□ -0.39
CAPN13-201ENST00000295055 GRAMD1CQ8IYS0 662 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 SLC7A3Q8WY07 619 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 TBC1D20Q96BZ9 403 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 SYNGAP1Q96PV0 1343 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 KATNBL1Q9H079 304 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 TUFT1Q9NNX1 390 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 KBTBD4Q9NVX7 518 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 KIAA1024Q9UPX6 916 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 COQ6Q9Y2Z9 468 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 ENC1O14682 589 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 XPOTO43592 962 aaKnown RBP12.64□□□□□ -0.39
CAPN13-201ENST00000295055 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
CAPN13-201ENST00000295055 SHBGP04278 402 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 CPA3P15088 417 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 IL32P24001 234 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 VHLP40337 213 aa12.64□□□□□ -0.39
CAPN13-201ENST00000295055 RGS2P41220 211 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms