RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 KCTD6Q8NC69 237 aa14.72□□□□□ -0.05
NXF1-201ENST00000294172 MCRS1Q96EZ8 462 aa14.72□□□□□ -0.05
NXF1-201ENST00000294172 SNX27Q96L92 541 aa14.72□□□□□ -0.05
NXF1-201ENST00000294172 CCT8L2Q96SF2 557 aa14.72□□□□□ -0.05
NXF1-201ENST00000294172 PLEKHA5Q9HAU0 1116 aa14.72□□□□□ -0.05
NXF1-201ENST00000294172 FAM49BQ9NUQ9 324 aa14.72□□□□□ -0.05
NXF1-201ENST00000294172 SGK1O00141 431 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 IGF2BP3O00425 579 aaKnown RBP eCLIP14.71□□□□□ -0.05
NXF1-201ENST00000294172 CST8O60676 142 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 STAU1O95793 577 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 MYL3P08590 195 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 DARSP14868 501 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 CYP2B6P20813 491 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 PTPN7P35236 360 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 GABRB2P47870 512 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 CDR1P51861 262 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 VCPP55072 806 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 BEX3Q00994 111 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 GPS1Q13098 491 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 AUHQ13825 339 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 CCDC38Q502W7 563 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 MORN1Q5T089 497 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 CST9Q5W186 159 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 LCLAT1Q6UWP7 414 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 CROCCP2Q86T23 111 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 C10orf88Q9H8K7 445 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 KLK14Q9P0G3 267 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 PIN4Q9Y237 131 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 SMIM35A0A1B0GVV1 85 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 TREHO43280 583 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 AGTP01019 485 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 KDELR1P24390 212 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 CDC42EP1Q00587 391 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 TAF1CQ15572 869 aaPredicted RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 PPP1R26Q5T8A7 1209 aaPredicted RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 SH3PXD2AQ5TCZ1 1133 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 HIBCHQ6NVY1 386 aaPredicted RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 DRICH1Q6PGQ1 229 aaPredicted RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 TTC39CQ8N584 583 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 BEST2Q8NFU1 509 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 CCHCR1Q8TD31 782 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 ZNF473Q8WTR7 871 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 TMEM40Q8WWA1 233 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 PIWIL1Q96J94 861 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 C9orf72Q96LT7 481 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 TMEM109Q9BVC6 243 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 RASSF4Q9H2L5 321 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 CNOT10Q9H9A5 744 aaKnown RBP14.71□□□□□ -0.05
NXF1-201ENST00000294172 NINJ2Q9NZG7 142 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 KIAA1257Q9ULG3 409 aa14.71□□□□□ -0.05
NXF1-201ENST00000294172 TRIP11Q15643 1979 aa14.71□□□□□ -0.06
NXF1-201ENST00000294172 RECQL4O94761 1208 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 ZNF865P0CJ78 1059 aaPredicted RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 GSCP56915 257 aaPredicted RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 OASLQ15646 514 aaKnown RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 CDO1Q16878 200 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 FAM183BPQ6ZVS7 135 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 SESTD1Q86VW0 696 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 OR6B3Q8NGW1 331 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 MYCBPAPQ8TBZ2 947 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 CALN1Q9BXU9 219 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 STMN4Q9H169 189 aaPredicted RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 ADAM7Q9H2U9 754 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 ASNSD1Q9NWL6 643 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 USP18Q9UMW8 372 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 SCN1AP35498 2009 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 MBLAC1A4D2B0 266 aaPredicted RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 GMNCA6NCL1 334 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 PFKMP08237 780 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 PSEN2P49810 448 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 ZNF157P51786 506 aaPredicted RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 OTUD4Q01804 1114 aaKnown RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 RFX6Q8HWS3 928 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 ACTL9Q8TC94 416 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 RXFP2Q8WXD0 754 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 RBM15Q96T37 977 aaKnown RBP eCLIP14.7□□□□□ -0.064e-6■■■■□ 20.7
NXF1-201ENST00000294172 LPIN3Q9BQK8 851 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 ROPN1BQ9BZX4 212 aaPredicted RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 ROPN1Q9HAT0 212 aaPredicted RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 DRG1Q9Y295 367 aaKnown RBP14.7□□□□□ -0.06
NXF1-201ENST00000294172 DERAQ9Y315 318 aa14.7□□□□□ -0.06
NXF1-201ENST00000294172 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
NXF1-201ENST00000294172 TRAPPC3O43617 180 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 TRUB2O95900 331 aaKnown RBP14.69□□□□□ -0.06
NXF1-201ENST00000294172 ITGAVP06756 1048 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 CHN1P15882 459 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 GPD1P21695 349 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 ZNF143P52747 638 aaPredicted RBP14.69□□□□□ -0.06
NXF1-201ENST00000294172 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
NXF1-201ENST00000294172 RAB6CQ53S08 254 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 HP1BP3Q5SSJ5 553 aaPredicted RBP14.69□□□□□ -0.06
NXF1-201ENST00000294172 CYP4F22Q6NT55 531 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 PMF1Q6P1K2 205 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 C7orf31Q8N865 590 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 NKD2Q969F2 451 aaPredicted RBP14.69□□□□□ -0.06
NXF1-201ENST00000294172 RAB6CQ9H0N0 254 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 CTNNAL1Q9UBT7 734 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 HCRTO43612 131 aa14.69□□□□□ -0.06
NXF1-201ENST00000294172 FAM107AO95990 144 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms