RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 KLK14Q9P0G3 267 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 UVRAGQ9P2Y5 699 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
SSRP1-202ENST00000293880 PSMD14O00487 310 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 PSMD3O43242 534 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 ENDOD1O94919 500 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 PSMC6P62333 389 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 MRPS35P82673 323 aaKnown RBP16.73■□□□□ 0.27
SSRP1-202ENST00000293880 CYP51A1Q16850 503 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 ZSWIM2Q8NEG5 633 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 BLOC1S5Q8TDH9 187 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 MPP4Q96JB8 637 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 GRID1Q9ULK0 1009 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 AP3M2P53677 418 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 CSNK2BP67870 215 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 PRAMEF18Q5VWM3 479 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 MTDHQ86UE4 582 aaKnown RBP16.73■□□□□ 0.27
SSRP1-202ENST00000293880 DNAJC7Q99615 494 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 SAC3D1A6NKF1 404 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 CYP27B1O15528 508 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 BGNP21810 368 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 MED15Q96RN5 788 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 ERP44Q9BS26 406 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
SSRP1-202ENST00000293880 ALG6Q9Y672 507 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 TAF4O00268 1085 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 TOMM70O94826 608 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 ZNF682O95780 498 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 PCNAP12004 261 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 C11orf63Q6NUN7 778 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 PAK5Q9P286 719 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 FBXO40Q9UH90 709 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 ATP9AO75110 1047 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 FAM107AO95990 144 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 FEN1P39748 380 aaKnown RBP16.72■□□□□ 0.27
SSRP1-202ENST00000293880 EML3Q32P44 896 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 CALML6Q8TD86 181 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 ROGDIQ9GZN7 287 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 SPRTNQ9H040 489 aaPredicted RBP16.72■□□□□ 0.27
SSRP1-202ENST00000293880 APPL1Q9UKG1 709 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 CASP4P49662 377 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 RBP5P82980 135 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 EZH2Q15910 746 aaKnown RBP16.72■□□□□ 0.27
SSRP1-202ENST00000293880 TBC1D19Q8N5T2 526 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 TNIP2Q8NFZ5 429 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 DOLKQ9UPQ8 538 aa16.72■□□□□ 0.27
SSRP1-202ENST00000293880 TCHHL1Q5QJ38 904 aaPredicted RBP16.72■□□□□ 0.27
SSRP1-202ENST00000293880 PSMC3P17980 439 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 ERVK-24P63145 666 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 CLEC16AQ2KHT3 1053 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 SCUBE1Q8IWY4 988 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 BBS7Q8IWZ6 715 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 REXO4Q9GZR2 422 aaKnown RBP16.71■□□□□ 0.27
SSRP1-202ENST00000293880 SOX6P35712 828 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 IZUMO2Q6UXV1 221 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 UBASH3BQ8TF42 649 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 DDX50Q9BQ39 737 aaKnown RBP16.71■□□□□ 0.27
SSRP1-202ENST00000293880 IMPAD1Q9NX62 359 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 TSPAN9O75954 239 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 ITGB3P05106 788 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 AKR1D1P51857 326 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 SGSM1Q2NKQ1 1148 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 SNPHO15079 494 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 ST8SIA6P61647 398 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 PRKCEQ02156 737 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 ZNF614Q8N883 585 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 TPCN2Q8NHX9 752 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 CAPSLQ8WWF8 208 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 ZNF512Q96ME7 567 aaPredicted RBP16.71■□□□□ 0.27
SSRP1-202ENST00000293880 NMRK2Q9NPI5 230 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 MRPL39Q9NYK5 338 aaKnown RBP16.71■□□□□ 0.27
SSRP1-202ENST00000293880 CDY2AQ9Y6F7 541 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 CDY1Q9Y6F8 540 aa16.71■□□□□ 0.27
SSRP1-202ENST00000293880 PDS5AQ29RF7 1337 aaKnown RBP16.71■□□□□ 0.27
SSRP1-202ENST00000293880 EXOSC10Q01780 885 aaKnown RBP16.71■□□□□ 0.26
SSRP1-202ENST00000293880 COG2Q14746 738 aa16.71■□□□□ 0.26
SSRP1-202ENST00000293880 GLRA4Q5JXX5 417 aa16.71■□□□□ 0.26
SSRP1-202ENST00000293880 C10orf120Q5SQS8 335 aa16.71■□□□□ 0.26
SSRP1-202ENST00000293880 CATSPER2Q96P56 530 aa16.71■□□□□ 0.26
SSRP1-202ENST00000293880 CINPQ9BW66 212 aaPredicted RBP16.71■□□□□ 0.26
SSRP1-202ENST00000293880 SPATA31E1Q6ZUB1 1445 aa16.71■□□□□ 0.26
SSRP1-202ENST00000293880 NRKQ7Z2Y5 1582 aa16.71■□□□□ 0.26
SSRP1-202ENST00000293880 FAM200BP0CF97 657 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PTGER2P43116 358 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 FEZF2Q8TBJ5 459 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PIH1D1Q9NWS0 290 aaKnown RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 DNAJC16Q9Y2G8 782 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PIPSLA2A3N6 862 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 FAM25AB3EWG3 89 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 FAM25CB3EWG5 89 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 FAM25GB3EWG6 89 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 SUPT7LO94864 414 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 RHOBTB3O94955 611 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 MT-CO1P00395 513 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 DDX5P17844 614 aaKnown RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 BAATQ14032 418 aaPredicted RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 KLHDC7AQ5VTJ3 777 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PDPK2PQ6A1A2 396 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 FAM84BQ96KN1 310 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms