RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 UBE2TQ9NPD8 197 aaPredicted RBP28.57■■■□□ 2.16
SSU72-201ENST00000291386 ZFP37Q9Y6Q3 630 aaPredicted RBP28.57■■■□□ 2.16
SSU72-201ENST00000291386 CLDN5O00501 218 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 NOL4O94818 638 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 FGF19O95750 216 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 HMGA1P17096 107 aaKnown RBP28.56■■■□□ 2.16
SSU72-201ENST00000291386 MFAP3P55082 362 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 SLC5A9Q2M3M2 681 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 ARHGAP17Q68EM7 881 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 SCN4BQ8IWT1 228 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 ZDHHC14Q8IZN3 488 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 PLCD3Q8N3E9 789 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 TDRD5Q8NAT2 981 aaKnown RBP28.56■■■□□ 2.16
SSU72-201ENST00000291386 GIPC2Q8TF65 315 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 CYFIP2Q96F07 1278 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 MED10Q9BTT4 135 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 FAM49BQ9NUQ9 324 aa28.56■■■□□ 2.16
SSU72-201ENST00000291386 MRPS23Q9Y3D9 190 aaKnown RBP28.56■■■□□ 2.16
SSU72-201ENST00000291386 C2CD4DB7Z1M9 353 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 PES1O00541 588 aaKnown RBP28.55■■■□□ 2.16
SSU72-201ENST00000291386 PAEPP09466 180 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 ATP1A3P13637 1013 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 CCDC130P13994 396 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 TMEM270Q6UE05 265 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 GJD3Q8N144 294 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 ITFG1Q8TB96 612 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 TRMT2BQ96GJ1 504 aaKnown RBP28.55■■■□□ 2.16
SSU72-201ENST00000291386 MYRFLQ96LU7 910 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 HEXIM2Q96MH2 286 aaKnown RBP28.55■■■□□ 2.16
SSU72-201ENST00000291386 CSNK1G1Q9HCP0 422 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 TMEM30AQ9NV96 361 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 EPS15L1Q9UBC2 864 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 KIAA1257Q9ULG3 409 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 PCDHB4Q9Y5E5 795 aa28.55■■■□□ 2.16
SSU72-201ENST00000291386 SLC38A8A6NNN8 435 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 F8VP50 259 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 ANXA13P27216 316 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 CCR2P41597 374 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 CACNA2D1P54289 1103 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 FKBP15Q5T1M5 1219 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 SDHAF4Q5VUM1 108 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 LRSAM1Q6UWE0 723 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 GET4Q7L5D6 327 aaPredicted RBP28.54■■■□□ 2.16
SSU72-201ENST00000291386 GPR152Q8TDT2 470 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 NECAB3Q96P71 396 aaPredicted RBP28.54■■■□□ 2.16
SSU72-201ENST00000291386 MYADMQ96S97 322 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 ZNF334Q9HCZ1 680 aaPredicted RBP28.54■■■□□ 2.16
SSU72-201ENST00000291386 CDH7Q9ULB5 785 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 C5orf42Q9H799 3197 aa28.54■■■□□ 2.16
SSU72-201ENST00000291386 LGALS16A8MUM7 142 aa28.53■■■□□ 2.16
SSU72-201ENST00000291386 MOSPD3O75425 235 aa28.53■■■□□ 2.16
SSU72-201ENST00000291386 ZNF132P52740 706 aa28.53■■■□□ 2.16
SSU72-201ENST00000291386 PPP1R26Q5T8A7 1209 aaPredicted RBP28.53■■■□□ 2.16
SSU72-201ENST00000291386 FGF13Q92913 245 aa28.53■■■□□ 2.16
SSU72-201ENST00000291386 IL21Q9HBE4 155 aa28.53■■■□□ 2.16
SSU72-201ENST00000291386 DMAP1Q9NPF5 467 aaPredicted RBP28.53■■■□□ 2.16
SSU72-201ENST00000291386 PLCB1Q9NQ66 1216 aa28.53■■■□□ 2.16
SSU72-201ENST00000291386 MYH10P35580 1976 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 AP1G2O75843 785 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 VDRP11473 427 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 MYL4P12829 197 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 LAMP2P13473 410 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 RFX1P22670 979 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 GBP2P32456 591 aaPredicted RBP28.52■■■□□ 2.16
SSU72-201ENST00000291386 APBA1Q02410 837 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 TAF12Q16514 161 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 GJB7Q6PEY0 223 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 ZMIZ2Q8NF64 920 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 TCEAL4Q96EI5 215 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 SMOQ99835 787 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 CD320Q9NPF0 282 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 KRT82Q9NSB4 513 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 GDE1Q9NZC3 331 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 EHD2Q9NZN4 543 aa28.52■■■□□ 2.16
SSU72-201ENST00000291386 UXTQ9UBK9 157 aaPredicted RBP28.52■■■□□ 2.16
SSU72-201ENST00000291386 DENND4CQ5VZ89 1909 aa28.51■■■□□ 2.16
SSU72-201ENST00000291386 NCOR1O75376 2440 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 RNF225M0QZC1 329 aaPredicted RBP28.51■■■□□ 2.15
SSU72-201ENST00000291386 FAM200BP0CF97 657 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 ADORA2BP29275 332 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 CDC25CP30307 473 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 MTMR3Q13615 1198 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 KLHDC7AQ5VTJ3 777 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 DENND5BQ6ZUT9 1274 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 GAREM2Q75VX8 874 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 LUZP1Q86V48 1076 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 NPAS3Q8IXF0 933 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 RBBP8NLQ8NC74 664 aaPredicted RBP28.51■■■□□ 2.15
SSU72-201ENST00000291386 SHKBP1Q8TBC3 707 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 KCNK16Q96T55 309 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 TTLL2Q9BWV7 592 aa28.51■■■□□ 2.15
SSU72-201ENST00000291386 PATJQ8NI35 1801 aa28.5■■■□□ 2.15
SSU72-201ENST00000291386 F11P03951 625 aa28.5■■■□□ 2.15
SSU72-201ENST00000291386 SP100P23497 879 aaPredicted RBP28.5■■■□□ 2.15
SSU72-201ENST00000291386 SSTR3P32745 418 aaPredicted RBP28.5■■■□□ 2.15
SSU72-201ENST00000291386 TPM4P67936 248 aa28.5■■■□□ 2.15
SSU72-201ENST00000291386 SGO2Q562F6 1265 aa28.5■■■□□ 2.15
SSU72-201ENST00000291386 CLEC20AQ6ZU45 233 aa28.5■■■□□ 2.15
SSU72-201ENST00000291386 SHC3Q92529 594 aa28.5■■■□□ 2.15
SSU72-201ENST00000291386 ERGIC2Q96RQ1 377 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms