RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ESRRBO95718 433 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ATP4AP20648 1035 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 NFKBIAP25963 317 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ROR2Q01974 943 aaKnown RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 BTG3Q14201 252 aaPredicted RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 STILQ15468 1287 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 DDHD1Q8NEL9 900 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 VPS11Q9H270 941 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 DEAF1O75398 565 aaPredicted RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ZBED1O96006 694 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ITIH2P19823 946 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 TSEN2Q8NCE0 465 aaKnown RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 SLC35G2Q8TBE7 412 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 PRCCQ92733 491 aaPredicted RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 RBM41Q96IZ5 413 aaKnown RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 KIFC3Q9BVG8 833 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 CCDC134Q9H6E4 229 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 RNF186Q9NXI6 227 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ADAM22Q9P0K1 906 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 SCHIP1Q9P0W5 487 aaPredicted RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 PLAGL2Q9UPG8 496 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 PKN1Q16512 942 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 C4orf50Q6ZRC1 276 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 O00370 1275 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 OPLAHO14841 1288 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 EXTL3O43909 919 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 EGFRP00533 1210 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 MORF4L2Q15014 288 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 NTRK3Q16288 839 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ARHGAP15Q53QZ3 475 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 SNX30Q5VWJ9 437 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 NLRP9Q7RTR0 991 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ATL2Q8NHH9 583 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 CASP10Q92851 521 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 KLF6Q99612 283 aaPredicted RBP11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 DNAJC7Q99615 494 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 TRIM15Q9C019 465 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 TRIM33Q9UPN9 1127 aa11.86□□□□□ -0.51
NPC1L1-201ENST00000289547 APOA1P02647 267 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 FAM153BP0C7A2 387 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 ODC1P11926 461 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PCBP1Q15365 356 aaKnown RBP eCLIP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 FAM153CQ494X1 144 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 LVRNQ6Q4G3 990 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PLPPR4Q7Z2D5 763 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 TMEM35BQ8NCS4 154 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 FBXL13Q8NEE6 735 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 CATSPER2Q96P56 530 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 DDX50Q9BQ39 737 aaKnown RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 FAM153AQ9UHL3 310 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PHTF1Q9UMS5 762 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 LRG1P02750 347 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 OVGP1Q12889 678 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 TRIM16LQ309B1 348 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 IZUMO2Q6UXV1 221 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 ERICH1Q86X53 443 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 CCNYQ8ND76 341 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 OSMRQ99650 979 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PORCNQ9H237 461 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 GID8Q9NWU2 228 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 IL1RAPL1Q9NZN1 696 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 UBIAD1Q9Y5Z9 338 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 NPHP3-ACAD11A0A0J9YXS1 232 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 GFAPP14136 432 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 TAF6P49848 677 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 CCDC15Q0P6D6 951 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 SLC12A1Q13621 1099 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PRPSAP1Q14558 356 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 MAPRE1Q15691 268 aaKnown RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PAN2Q504Q3 1202 aaKnown RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 RNF219Q5W0B1 726 aaPredicted RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 FRMD5Q7Z6J6 570 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PPTC7Q8NI37 304 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 CAAP1Q9H8G2 361 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 MRPL40Q9NQ50 206 aaKnown RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 A0A1W2PQJ5 194 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 GSTA4O15217 222 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 TAL1P17542 331 aaPredicted RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 KCNA4P22459 653 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 ARL4AP40617 200 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 ALDH1A3P47895 512 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 ATXN3P54252 364 aaPredicted RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.511e-6■■□□□ 13.9
NPC1L1-201ENST00000289547 SGSM1Q2NKQ1 1148 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 RBBP8NLQ8NC74 664 aaPredicted RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 RXFP1Q9HBX9 757 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms