RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KCNC1P48547 511 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 CLCN2P51788 898 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 EVCP57679 992 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 PHC1P78364 1004 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 CAP1Q01518 475 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 KIAA2012Q0VF49 1180 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 TRPC3Q13507 836 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 ERV3-1Q14264 604 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 TMEM177Q53S58 311 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 KAZNQ674X7 775 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 FAM47EQ6ZV65 393 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 MAEAQ7L5Y9 396 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 TMEFF1Q8IYR6 380 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 RNF152Q8N8N0 203 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 C2orf69Q8N8R5 385 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 LINC01356Q8N9X3 169 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 AVL9Q8NBF6 648 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 TOR1AIP2Q8NFQ8 470 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 TTLL11Q8NHH1 800 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 PCDH19Q8TAB3 1148 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 NSUN4Q96CB9 384 aaKnown RBP5.03□□□□□ -1.6
CD44-202ENST00000278385 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 PYM1Q9BRP8 204 aaKnown RBP5.03□□□□□ -1.6
CD44-202ENST00000278385 COLEC11Q9BWP8 271 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 CELF4Q9BZC1 486 aaKnown RBP5.03□□□□□ -1.6
CD44-202ENST00000278385 C2orf40Q9H1Z8 148 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 EPB41L4AQ9HCS5 686 aaPredicted RBP5.03□□□□□ -1.6
CD44-202ENST00000278385 USP40Q9NVE5 1235 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 TMOD3Q9NYL9 352 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 COQ6Q9Y2Z9 468 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 MTF2Q9Y483 593 aaPredicted RBP5.03□□□□□ -1.6
CD44-202ENST00000278385 GPR45Q9Y5Y3 372 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 IGSF1Q8N6C5 1336 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 DDX3XO00571 662 aaKnown RBP eCLIP5.02□□□□□ -1.61
CD44-202ENST00000278385 WNT9AO14904 365 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 NKRFO15226 690 aaKnown RBP eCLIP5.02□□□□□ -1.61
CD44-202ENST00000278385 SLC7A4O43246 635 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 NDUFS2O75306 463 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 FSBPO95073 299 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 CYP1A1P04798 512 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 C8BP07358 591 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 ALOX15P16050 662 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 ATP5DP30049 168 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 IL13P35225 146 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 SERPINF1P36955 418 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 HNF4AP41235 474 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 MTHFSP49914 203 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 LIMK1P53667 647 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 RCAN1P53805 252 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 CASP6P55212 293 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 JAG1P78504 1218 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 KIF23Q02241 960 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 UBXN1Q04323 297 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 MAPK7Q13164 816 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 SMAD4Q13485 552 aaKnown RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 PMS2P11Q13670 270 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 TNIP1Q15025 636 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 PDCD1Q15116 288 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 RASA2Q15283 850 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 TAF7Q15545 349 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 ZKSCAN8Q15776 578 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 SMAD2Q15796 467 aaKnown RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 ARHGAP44Q17R89 818 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 ZNF827Q17R98 1081 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 PAN2Q504Q3 1202 aaKnown RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 KRTCAP3Q53RY4 240 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 FIGNQ5HY92 759 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 C1orf141Q5JVX7 400 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 SULT6B1Q6IMI4 303 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 TEPPQ6URK8 271 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 RAPH1Q70E73 1250 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 OTUD6AQ7L8S5 288 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 DNAJB7Q7Z6W7 309 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 MOGAT3Q86VF5 341 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 OSTM1Q86WC4 334 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 TRIML1Q8N9V2 468 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 OR10H5Q8NGA6 315 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 GOT1L1Q8NHS2 421 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 RUFY2Q8WXA3 655 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 PIGBQ92521 554 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 RBM18Q96H35 190 aaKnown RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 EYA3Q99504 573 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 C7orf25Q9BPX7 421 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 C11orf84Q9BUA3 381 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 AGXT2Q9BYV1 514 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 UNKQ9C0B0 810 aaKnown RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 L2HGDHQ9H9P8 463 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 OBP2BQ9NPH6 170 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 TMOD4Q9NZQ9 345 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 TUBD1Q9UJT1 453 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 CROTQ9UKG9 612 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 NOC2LQ9Y3T9 749 aaKnown RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 ZFP37Q9Y6Q3 630 aaPredicted RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 NCAPD2Q15021 1401 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 TNS1Q9HBL0 1735 aaKnown RBP5.02□□□□□ -1.61
CD44-202ENST00000278385 NPC1L1Q9UHC9 1359 aa5.02□□□□□ -1.61
CD44-202ENST00000278385 PASKQ96RG2 1323 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 SLC12A8A0AV02 714 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms