RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 MCAMP43121 646 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 EMP3P54852 163 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CDC16Q13042 620 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 TRAF1Q13077 416 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 ARHGAP44Q17R89 818 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 PGS1Q32NB8 556 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 GNASQ5JWF2 1037 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 KRT25Q7Z3Z0 450 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 LZTR1Q8N653 840 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CCDC155Q8N6L0 562 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 FAM71BQ8TC56 605 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 EPSTI1Q96J88 318 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 PSMG3-AS1Q96PY0 264 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 NUP58Q9BVL2 599 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 HAPLN2Q9GZV7 340 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 IL25Q9H293 177 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 CYP4F11Q9HBI6 524 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 SLC39A2Q9NP94 309 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 TM7SF3Q9NS93 570 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 SAMSN1Q9NSI8 373 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 PIH1D1Q9NWS0 290 aaKnown RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 GPN3Q9UHW5 284 aaPredicted RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 BLOC1S6Q9UL45 172 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 PCDHB6Q9Y5E3 794 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 MAGED1Q9Y5V3 778 aaPredicted RBP3.1□□□□□ -1.91
HERC4-201ENST00000277817 NAV1Q8NEY1 1877 aa3.1□□□□□ -1.91
HERC4-201ENST00000277817 P4HA2O15460 535 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 IRAK2O43187 625 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PPP6R2O75170 966 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 DLGAP3O95886 979 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 EEF2P13639 858 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 DESP17661 470 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 FMO1Q01740 532 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 SMC1AQ14683 1233 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 SLC9C1Q4G0N8 1177 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 EMC10Q5UCC4 262 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PGM2L1Q6PCE3 622 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 DPP8Q6V1X1 898 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 CLEC17AQ6ZS10 378 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 CCDC25Q86WR0 208 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 HEATR4Q86WZ0 1026 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 CXorf67Q86X51 503 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 GALNT13Q8IUC8 556 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MICALL1Q8N3F8 863 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 ANKRD13CQ8N6S4 541 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 VGLL2Q8N8G2 317 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MAML1Q92585 1016 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MAELQ96JY0 434 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 PPP1R13BQ96KQ4 1090 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 LRGUKQ96M69 825 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MFSD14AQ96MC6 490 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MMP19Q99542 508 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 SORBS1Q9BX66 1292 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 TRIM31Q9BZY9 425 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.09□□□□□ -1.91
HERC4-201ENST00000277817 FOXP1Q9H334 677 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 USP40Q9NVE5 1235 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 USP36Q9P275 1121 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 ARPP21Q9UBL0 812 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 ADGRE2Q9UHX3 823 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 NAGPAQ9UK23 515 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MTF2Q9Y483 593 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 AFG3L2Q9Y4W6 797 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PCDHA11Q9Y5I1 949 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 CLDN16Q9Y5I7 305 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 TANC1Q9C0D5 1861 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 DDX39AO00148 427 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 SH2B2O14492 632 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 STX10O60499 249 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 IFNAR1P17181 557 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 HPDP32754 393 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 THBS2P35442 1172 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PPP1R2P41236 205 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 SEPHS1P49903 392 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 DNM2P50570 870 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 IL2P60568 153 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 RAB1AP62820 205 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 YBX1P67809 324 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 PUM1Q14671 1186 aaKnown RBP eCLIP3.09□□□□□ -1.91
HERC4-201ENST00000277817 MUM1Q2TAK8 710 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MAP3K21Q5TCX8 1036 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 SUSD4Q5VX71 490 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 C8orf74Q6P047 294 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 GSTA5Q7RTV2 222 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 KLHL7Q8IXQ5 586 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 ZNF619Q8N2I2 560 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PPP1R14CQ8TAE6 165 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 FAM76AQ8TAV0 307 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 UBLCP1Q8WVY7 318 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 PTP4A1Q93096 173 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 ACAP3Q96P50 834 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 NOX5Q96PH1 765 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PLVAPQ9BX97 442 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 IFIH1Q9BYX4 1025 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 TSGA10Q9BZW7 698 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 WNT8AQ9H1J5 351 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PCDHA12Q9UN75 941 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 LRCH1Q9Y2L9 728 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 COQ6Q9Y2Z9 468 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 SAR1BQ9Y6B6 198 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms