RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 LRPAP1P30533 357 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 CDKN2BP42772 138 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 TAF6P49848 677 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 KCNA10Q16322 511 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 SV2CQ496J9 727 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 TTMPQ5BVD1 217 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 FAM102AQ5T9C2 384 aaPredicted RBP10.09□□□□□ -0.79
TRIM55-201ENST00000276573 KAZNQ674X7 775 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 CCSAPQ6IQ19 270 aaPredicted RBP10.09□□□□□ -0.79
TRIM55-201ENST00000276573 PMF1Q6P1K2 205 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 FAM183BPQ6ZVS7 135 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 TMEM110Q86TL2 294 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 STK32AQ8WU08 396 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 KBTBD7Q8WVZ9 684 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 ZWILCHQ9H900 591 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA2P5Q9HBQ8 144 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 XPNPEP3Q9NQH7 507 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 ASNSD1Q9NWL6 643 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 RNF186Q9NXI6 227 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA6AQ9NYA3 693 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 WHRNQ9P202 907 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 HESX1Q9UBX0 185 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 MTRF1LQ9UGC7 380 aaKnown RBP10.09□□□□□ -0.79
TRIM55-201ENST00000276573 ATP8A1Q9Y2Q0 1164 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 LRRD1A4D1F6 860 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 TULP2O00295 520 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 KIF3CO14782 793 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 HCRTO43612 131 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 AOC2O75106 756 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 GABBR2O75899 941 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 TRUB2O95900 331 aaKnown RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 GAS8O95995 478 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 RPLP2P05387 115 aaKnown RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ASGR1P07306 291 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 FAM163BP0C2L3 166 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 GPD1P21695 349 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 LMO2P25791 158 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 RGS7P49802 495 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ZNF143P52747 638 aaPredicted RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 PMS2P54278 862 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 LILRA4P59901 499 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 SP3Q02447 781 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 LMNB2Q03252 620 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 MGAT3Q09327 533 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 NOGQ13253 232 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 TFDP3Q5H9I0 405 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 CEP85LQ5SZL2 805 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ZNF618Q5T7W0 954 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 DRICH1Q6PGQ1 229 aaPredicted RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ZNF771Q7L3S4 317 aaPredicted RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 APPL2Q8NEU8 664 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 FAM76AQ8TAV0 307 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 RXFP2Q8WXD0 754 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 FAM118BQ9BPY3 351 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 CNPY3Q9BT09 278 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 SENP6Q9GZR1 1112 aaPredicted RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 SNX25Q9H3E2 840 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 DPEP3Q9H4B8 488 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 TMBIM4Q9HC24 238 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 GPBP1L1Q9HC44 474 aaPredicted RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 FAM49BQ9NUQ9 324 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 DRG1Q9Y295 367 aaKnown RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 EFR3BQ9Y2G0 817 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 GRIN2DO15399 1336 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 SCN10AQ9Y5Y9 1956 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 C2CD4BA6NLJ0 364 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 TP73O15350 636 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 LIASO43766 372 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 HUS1O60921 280 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 CTSHP09668 335 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 PDGFRAP16234 1089 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 KDELR1P24390 212 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 MIPP30301 263 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 PCK1P35558 622 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 SNX16P57768 344 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 SLC6A3Q01959 620 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 PDE4CQ08493 712 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 CALCOCO2Q13137 446 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 TAZQ16635 292 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 TRNP1Q6NT89 227 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ANKRD52Q8NB46 1076 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 CMASQ8NFW8 434 aaPredicted RBP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 OR2W6PQ8NHA6 318 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 KHSRPQ92945 711 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRIM55-201ENST00000276573 SNF8Q96H20 258 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 CCDC114Q96M63 670 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 FAM105AQ9NUU6 356 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 ASIC3Q9UHC3 531 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 PCSK1NQ9UHG2 260 aa10.08□□□□□ -0.8
TRIM55-201ENST00000276573 PDCD11Q14690 1871 aaKnown RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 MEIS3P2A8K0S8 358 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 GPR182O15218 404 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 PRKAR2AP13861 404 aaKnown RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 ELNP15502 786 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 WARSP23381 471 aaKnown RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms