RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PLXNA3P51805 1871 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 M0QYV0 167 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 FAM200BP0CF97 657 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 NPR3P17342 541 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 POU3F3P20264 500 aaPredicted RBP18.22■□□□□ 0.51
SKP2-201ENST00000274254 CYP2F1P24903 491 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 ANXA13P27216 316 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 CDH5P33151 784 aaPredicted RBP18.22■□□□□ 0.51
SKP2-201ENST00000274254 EIF4A3P38919 411 aaKnown RBP18.22■□□□□ 0.51
SKP2-201ENST00000274254 GPD2P43304 727 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 CACNA2D1P54289 1103 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 BCAT1P54687 386 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 DUSP4Q13115 394 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 ASTE1Q2TB18 679 aaPredicted RBP18.22■□□□□ 0.51
SKP2-201ENST00000274254 DENND1BQ6P3S1 775 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 VSTM1Q6UX27 236 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 CYP26C1Q6V0L0 522 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 TRIM72Q6ZMU5 477 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 CLEC20AQ6ZU45 233 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 LRRC8AQ8IWT6 810 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 SLC30A5Q8TAD4 765 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 PCDHB18PQ96TA0 734 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 BAG1Q99933 345 aaPredicted RBP18.22■□□□□ 0.51
SKP2-201ENST00000274254 HESX1Q9UBX0 185 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 FBXW11Q9UKB1 542 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 DDX3XO00571 662 aaKnown RBP eCLIP18.21■□□□□ 0.513e-12■■■■■ 59.2
SKP2-201ENST00000274254 AP1G2O75843 785 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 BEST1O76090 585 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 SEC24AO95486 1093 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 LSM8O95777 96 aaKnown RBP18.21■□□□□ 0.51
SKP2-201ENST00000274254 GLUD1P00367 558 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 CYP1A1P04798 512 aaPredicted RBP18.21■□□□□ 0.51
SKP2-201ENST00000274254 HAPLN1P10915 354 aaPredicted RBP18.21■□□□□ 0.51
SKP2-201ENST00000274254 TNFAIP3P21580 790 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 BST2Q10589 180 aaKnown RBP18.21■□□□□ 0.51
SKP2-201ENST00000274254 DUSP6Q16828 381 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 HABP4Q5JVS0 413 aaKnown RBP18.21■□□□□ 0.51
SKP2-201ENST00000274254 TMTC1Q8IUR5 882 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 PASD1Q8IV76 773 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 TCEAL8Q8IYN2 117 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 WDTC1Q8N5D0 677 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 ZMIZ2Q8NF64 920 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 UBA3Q8TBC4 463 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 SLC22A17Q8WUG5 538 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 SLC35F5Q8WV83 523 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 SMOQ99835 787 aa18.21■□□□□ 0.51
SKP2-201ENST00000274254 NHEJ1Q9H9Q4 299 aaPredicted RBP18.21■□□□□ 0.51
SKP2-201ENST00000274254 MTCL1Q9Y4B5 1905 aaKnown RBP18.2■□□□□ 0.5
SKP2-201ENST00000274254 PER2O15055 1255 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 SETSIPP0DME0 302 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 UNGP13051 313 aaPredicted RBP18.2■□□□□ 0.5
SKP2-201ENST00000274254 NOMO3P69849 1222 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 PDE4CQ08493 712 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 VPS36Q86VN1 386 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
SKP2-201ENST00000274254 KCNK16Q96T55 309 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 CDCA3Q99618 268 aaPredicted RBP18.2■□□□□ 0.5
SKP2-201ENST00000274254 PDCL3Q9H2J4 239 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 NSUN3Q9H649 340 aaKnown RBP18.2■□□□□ 0.5
SKP2-201ENST00000274254 TLE6Q9H808 572 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 DMAP1Q9NPF5 467 aaPredicted RBP18.2■□□□□ 0.5
SKP2-201ENST00000274254 ADAMTS1Q9UHI8 967 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 SLC27A5Q9Y2P5 690 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 CEP83Q9Y592 693 aa18.2■□□□□ 0.5
SKP2-201ENST00000274254 A0A087X0T9 212 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 TULP2O00295 520 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 XPO1O14980 1071 aaKnown RBP18.19■□□□□ 0.5
SKP2-201ENST00000274254 FAM228BP0C875 321 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 PLA2G4AP47712 749 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 TUFMP49411 452 aaKnown RBP18.19■□□□□ 0.5
SKP2-201ENST00000274254 MAP3K7CLP57077 242 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 KCNC3Q14003 757 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 ADGRE1Q14246 886 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 CLEC16AQ2KHT3 1053 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 MGAT5BQ3V5L5 792 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 RBM23Q86U06 439 aaKnown RBP18.19■□□□□ 0.5
SKP2-201ENST00000274254 TMEM35BQ8NCS4 154 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 CCDC112Q8NEF3 446 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 STK32AQ8WU08 396 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 PPP2R3CQ969Q6 453 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 C8orf48Q96LL4 319 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 CCDC42Q96M95 316 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 CYP4F11Q9HBI6 524 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 CYTH4Q9UIA0 394 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 NENFQ9UMX5 172 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 HCFC2Q9Y5Z7 792 aa18.19■□□□□ 0.5
SKP2-201ENST00000274254 SOWAHDA6NJG2 315 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 HHLA1C9JL84 531 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 F8VP50 259 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 TRIM66O15016 1216 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
SKP2-201ENST00000274254 SPATA31D3P0C874 917 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 ELF1P32519 619 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 GRIK1P39086 918 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 NRIP1P48552 1158 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 KIF11P52732 1056 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 SLC8A3P57103 927 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 SLC18A3Q16572 532 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 SPATA31D4Q6ZUB0 917 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 RTL10Q7L3V2 364 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms