RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 TOPORSQ9NS56 1045 aaPredicted RBP9.21□□□□□ -0.93
TRIM43-201ENST00000272395 SAMD15Q9P1V8 674 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 ASIC3Q9UHC3 531 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 PADI3Q9ULW8 664 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 CNTN6Q9UQ52 1028 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 SCINQ9Y6U3 715 aa9.21□□□□□ -0.93
TRIM43-201ENST00000272395 LTBP2Q14767 1821 aa9.21□□□□□ -0.94
TRIM43-201ENST00000272395 CCT8L1PA6NM43 557 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 MGEA5O60502 916 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 RASSF9O75901 435 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 DNAJC8O75937 253 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 TTC4O95801 387 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 HLA-DRAP01903 254 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 ATF2P15336 505 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 IBSPP21815 317 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 IVDP26440 423 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 NAMPTP43490 491 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 PHKA2P46019 1235 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 IFI35P80217 286 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 TFDP1Q14186 410 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 SHHQ15465 462 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 TMEM240Q5SV17 173 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 MON1BQ7L1V2 547 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 ZNF410Q86VK4 478 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CCDC89Q8N998 374 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 EXD1Q8NHP7 514 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 MDM1Q8TC05 714 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CCHCR1Q8TD31 782 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 EPS8L3Q8TE67 593 aaKnown RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 SEPT8Q92599 483 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 PLCD4Q9BRC7 762 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CDC42EP4Q9H3Q1 356 aaKnown RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 LRRC4CQ9HCJ2 640 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 ST3GAL5Q9UNP4 418 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 TTLL13PA6NNM8 815 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 INO80B-WBP1J3KQ70 363 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 TP73O15350 636 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 B4GALT5O43286 388 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 THAP12O43422 761 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 FGBP02675 491 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 C4BPAP04003 597 aaKnown RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 EDN1P05305 212 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 RRM1P23921 792 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 PIK3CAP42336 1068 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 KCNJ1P48048 391 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 GTF2A1P52655 376 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 AP3M2P53677 418 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 MBTD1Q05BQ5 628 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 KLF1Q13351 362 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 XRCC4Q13426 336 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CNGA2Q16280 664 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CDCA2Q69YH5 1023 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 PLEKHA7Q6IQ23 1121 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CNKSR3Q6P9H4 555 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 DRICH1Q6PGQ1 229 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 TMCO2Q7Z6W1 182 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CCDC25Q86WR0 208 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 IPO4Q8TEX9 1081 aaKnown RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 C1orf54Q8WWF1 131 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 LINC01599Q8WXQ3 324 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 ZNF516Q92618 1163 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CCDC77Q9BR77 488 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 INO80BQ9C086 356 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 AAASQ9NRG9 546 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 KLC4Q9NSK0 619 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CXXC1Q9P0U4 656 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 CHORDC1Q9UHD1 332 aaPredicted RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 LGALS13Q9UHV8 139 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 ANAPC5Q9UJX4 755 aa9.2□□□□□ -0.94
TRIM43-201ENST00000272395 AGO2Q9UKV8 859 aaKnown RBP9.2□□□□□ -0.94
TRIM43-201ENST00000272395 RANBP2P49792 3224 aaKnown RBP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 LAMA2P24043 3122 aaKnown RBP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 PARNO95453 639 aaKnown RBP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 ABHD2P08910 425 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 TNNI1P19237 187 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 ACO1P21399 889 aaKnown RBP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 SCTRP47872 440 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 NOMO3P69849 1222 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 CDC42EP1Q00587 391 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 NR1H3Q13133 447 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 CUL2Q13617 745 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 STAT4Q14765 748 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 AMHR2Q16671 573 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 CATSPER4Q7RTX7 472 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 EXOC3L1Q86VI1 746 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 CPNE8Q86YQ8 564 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 RCOR2Q8IZ40 523 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 RIBC1Q8N443 379 aaPredicted RBP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 GBP7Q8N8V2 638 aaPredicted RBP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 MAGEC3Q8TD91 643 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 SGSM3Q96HU1 749 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 CPB2Q96IY4 423 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 TACO1Q9BSH4 297 aaKnown RBP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 PI4K2AQ9BTU6 479 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 TANC1Q9C0D5 1861 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 CCDC113Q9H0I3 377 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 SLC40A1Q9NP59 571 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms