RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NUP85Q9BW27 656 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FAM192AQ9GZU8 254 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MROH8Q9H579 483 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SUDS3Q9H7L9 328 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 PDLIM7Q9NR12 457 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RAB20Q9NX57 234 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 GSTTP1A0A1W2PQM5 241 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 LRRIQ4A6NIV6 560 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TRAFD1O14545 582 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 P4HA2O15460 535 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SUPT20HL2P0C7V6 817 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 KRT5P13647 590 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ATF2P15336 505 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 EDNRBP24530 442 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TCF7P36402 384 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CDR2Q01850 454 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CYP24A1Q07973 514 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CCL14Q16627 93 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MTDHQ86UE4 582 aaKnown RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FBXL13Q8NEE6 735 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ZNF564Q8TBZ8 553 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 HELQQ8TDG4 1101 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SH3TC2Q8TF17 1288 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SPIRE2Q8WWL2 714 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MAML1Q92585 1016 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 PCYT2Q99447 389 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CADM1Q9BY67 442 aaKnown RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ADAM33Q9BZ11 813 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 VCX3BQ9H321 246 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 VCX3AQ9NNX9 186 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ACTL7BQ9Y614 415 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 WDR81Q562E7 1941 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 HARSP12081 509 aaKnown RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 EMC2Q15006 297 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 C2CD6Q53TS8 623 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FAM71AQ8IYT1 594 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 C4orf33Q8N1A6 199 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MCPH1Q8NEM0 835 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 DTX3LQ8TDB6 740 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CCDC77Q9BR77 488 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ARHGAP39Q9C0H5 1083 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TMEM8AQ9HCN3 771 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ZNF302Q9NR11 478 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 EURLQ9NYK6 297 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 A0A0G2JMZ2 1700 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MROH7Q68CQ1 1323 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ABCD1P33897 745 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 LIG4P49917 911 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SPARCL1Q14515 664 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 XKR3Q5GH77 459 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ZBTB41Q5SVQ8 909 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NLRP9Q7RTR0 991 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 LCA5Q86VQ0 697 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 DENND1AQ8TEH3 1009 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ZNF516Q92618 1163 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SLCO2A1Q92959 643 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CDHR1Q96JP9 859 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 PPP1R16BQ96T49 567 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FAM118BQ9BPY3 351 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TRAIPQ9BWF2 469 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SPATA16Q9BXB7 569 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RHBDL2Q9NX52 303 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NOCTQ9UK39 431 aaKnown RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MYH9P35579 1960 aaKnown RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CAPN9O14815 690 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FSCN2O14926 492 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CYP2B6P20813 491 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RFX1P22670 979 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RRM1P23921 792 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RPA3P35244 121 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CCNFP41002 786 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MFAP3P55082 362 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NLRP11P59045 1033 aaKnown RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 OCRLQ01968 901 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 KPNB1Q14974 876 aaKnown RBP16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ACSBG2Q5FVE4 666 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SCARA3Q6AZY7 606 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SPOPLQ6IQ16 392 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TRABD2AQ86V40 505 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MFSD14AQ96MC6 490 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NT5C1BQ96P26 610 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TLE6Q9H808 572 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NPHS2Q9NP85 383 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ANKFY1Q9P2R3 1169 aa16.73■□□□□ 0.27
MAP1LC3B-201ENST00000268607 LAMA3Q16787 3333 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 hCG_2014768A0A024R1R8 64 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ADCY6O43306 1168 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 GJB1P08034 283 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FGFR1P11362 822 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CYP11B1P15538 503 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TNNI1P19237 187 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 USP46P62068 366 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FMO1Q01740 532 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CRHR2Q13324 411 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 PTK6Q13882 451 aa16.72■□□□□ 0.27
MAP1LC3B-201ENST00000268607 STAT4Q14765 748 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms