RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PAQR9Q6ZVX9 377 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 COLGALT2Q8IYK4 626 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 KATNAL2Q8IYT4 538 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 RSPH1Q8WYR4 309 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 SUSD3Q96L08 255 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 HSFY1Q96LI6 401 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 CRTAC1Q9NQ79 661 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 ST7Q9NRC1 585 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 METTL5Q9NRN9 209 aaKnown RBP17.25■□□□□ 0.35
TPM1-201ENST00000267996 CDH9Q9ULB4 789 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 TTC3P53804 2025 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 CCDC151A5D8V7 595 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 ACAT1P24752 427 aaKnown RBP17.24■□□□□ 0.35
TPM1-201ENST00000267996 ADORA2BP29275 332 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 PLA2G4AP47712 749 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 CLCN6P51797 869 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 PLCB3Q01970 1234 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 SEL1L2Q5TEA6 688 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 DAB2IPQ5VWQ8 1189 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
TPM1-201ENST00000267996 OLFML1Q6UWY5 402 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 ZNF280BQ86YH2 543 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 ZDHHC17Q8IUH5 632 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 RTP3Q9BQQ7 232 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 SYT15Q9BQS2 421 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 AP1M1Q9BXS5 423 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 DUSP16Q9BY84 665 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 TBC1D13Q9NVG8 400 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 ARGLU1Q9NWB6 273 aaPredicted RBP17.24■□□□□ 0.35
TPM1-201ENST00000267996 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
TPM1-201ENST00000267996 DSEQ9UL01 958 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 TBX21Q9UL17 535 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 TIMM13Q9Y5L4 95 aaPredicted RBP17.24■□□□□ 0.35
TPM1-201ENST00000267996 TSC2P49815 1807 aa17.24■□□□□ 0.35
TPM1-201ENST00000267996 ARHGEF37A1IGU5 675 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PAPSS1O43252 624 aaPredicted RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 TYMPP19971 482 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PCSK1P29120 753 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 SCNN1AP37088 669 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 BRCC3P46736 316 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 GJA8P48165 433 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 VSNL1P62760 191 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 RBM10P98175 930 aaKnown RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 ACAP1Q15027 740 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PKN2Q16513 984 aaKnown RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 FAM102AQ5T9C2 384 aaPredicted RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 OR6B2Q6IFH4 312 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 SLC13A5Q86YT5 568 aaPredicted RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 KHSRPQ92945 711 aaKnown RBP eCLIP17.23■□□□□ 0.354e-9■□□□□ 9.5
TPM1-201ENST00000267996 KRT12Q99456 494 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PLVAPQ9BX97 442 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 USTQ9Y2C2 406 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 NR2E1Q9Y466 385 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PCDHB7Q9Y5E2 793 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 SCN5AQ14524 2016 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 C2CD4BA6NLJ0 364 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 I3L4J1 428 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 XPO1O14980 1071 aaKnown RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 ITGB1P05556 798 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PSMA2P25787 234 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 ACADSBP45954 432 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 SLC6A3Q01959 620 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PPP2R5EQ16537 467 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 CCDC142Q17RM4 750 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 PAN2Q504Q3 1202 aaKnown RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 MDH1BQ5I0G3 518 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 C8orf74Q6P047 294 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 METTL23Q86XA0 190 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 ARFGAP1Q8N6T3 406 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 EXD1Q8NHP7 514 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 DIS3LQ8TF46 1054 aaKnown RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 HDAC7Q8WUI4 952 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 HNRNPLLQ8WVV9 542 aaKnown RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 SCLYQ96I15 445 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 ACBD6Q9BR61 282 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 B3GNT5Q9BYG0 378 aa17.23■□□□□ 0.35
TPM1-201ENST00000267996 DMGDHQ9UI17 866 aaKnown RBP17.23■□□□□ 0.35
TPM1-201ENST00000267996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.22■□□□□ 0.35
TPM1-201ENST00000267996 FSCN2O14926 492 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 TCF4P15884 667 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 NPR3P17342 541 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 MCM3P25205 808 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
TPM1-201ENST00000267996 ARCQ7LC44 396 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 ZDHHC14Q8IZN3 488 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 EMC1Q8N766 993 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 MYCBPAPQ8TBZ2 947 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 PIWIL1Q96J94 861 aaKnown RBP17.22■□□□□ 0.35
TPM1-201ENST00000267996 CASD1Q96PB1 797 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 SLITRK6Q9H5Y7 841 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 PCDHB8Q9UN66 801 aa17.22■□□□□ 0.35
TPM1-201ENST00000267996 MYBPHLA2RUH7 354 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 BHMG1C9JSJ3 638 aaPredicted RBP17.21■□□□□ 0.35
TPM1-201ENST00000267996 PIK3R2O00459 728 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 CLDN5O00501 218 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 DPYSL4O14531 572 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 SART1O43290 800 aaKnown RBP17.21■□□□□ 0.35
TPM1-201ENST00000267996 LRCH4O75427 683 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 CYP2C18P33260 490 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms